Lonsdalea britannica: CKQ53_01870 Help Entry CKQ53_01870       CDS       T05623                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism lbq  Lonsdalea britannica Pathway lbq03030   DNA replication lbq03410   Base excision repair lbq03420   Nucleotide excision repair lbq03430   Mismatch repair Brite KEGG Orthology (KO) [BR:lbq00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     CKQ53_01870    03410 Base excision repair     CKQ53_01870    03420 Nucleotide excision repair     CKQ53_01870    03430 Mismatch repair     CKQ53_01870  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:lbq03032]     CKQ53_01870    03400 DNA repair and recombination proteins [BR:lbq03400]     CKQ53_01870 Enzymes [BR:lbq01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      CKQ53_01870 DNA replication proteins [BR:lbq03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      CKQ53_01870 DNA repair and recombination proteins [BR:lbq03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      CKQ53_01870    NER (nucleotide excision repair)     GGR (global genome repair) factors      CKQ53_01870    MMR (mismatch excision repair)     DNA ligase      CKQ53_01870   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       CKQ53_01870 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD Nlig-Ia PTCB-BRCT DUF4796_N Motif Other DBs NCBI-ProteinID:  AXW85847 UniProt:  A0AAD0SD55 LinkDB All DBs Position complement(380587..382635) Genome browser AA seq 682 aa AA seqDB search MSEKGFTPLNSQSVEARLETLRTQLRYHEHKYHVEDAPEIPDAEYDRLMRELKALEQEHP ALITPDSPTQRVGAEPLAAFESVRHEVPMLSLDNVFDEQSFLAFCKRINDRLKHADDLSF CCELKLDGLAVSLLYEDGVLVRAATRGDGATGENITSNIRTIGAIPLRLSGDAIPRRLEV RGEVFMTHSGFEALNEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGLI EDGELPDSHWERLQRFKSWGLPVSDRIRRCCGSDAVLDFYRQVEETRSDLGFDIDGVVIK VDDLALQERLGFVARAPRWAVAYKFPAQEQLTWLRDVEFQVGRTGAITPVARLEPVAVAG VMVSNATLHNADEIDRLGIRIGDRVTVRRAGDVIPQIVSVVLTERPEETQPIAFPDQCPV CGSDVERVEGEAVTRCTGGLFCGAQRKEALKHFVSRRAMDVDGMGDKIIDQLVEKEYVHT PADLFRLTAGILTGLDRMGPKSAQNLVNALEKAKSTTFARFLYALGIRDVGEATAASLAA HFLTPQALSDADLEALQQVQDVGIVVATRVRNFLDEEHNQQVIRELIDEIGIHWPEPVVV DVDESSSPFAGKTLVLTGSLSVLSRDEAKDRLTALGAKVSGSVSKKTDMVIAGEAAGSKL TKAQSLGIPVIDEAEMMRLLEQ NT seq 2049 nt NT seq  +upstreamnt  +downstreamnt atgtcagagaaagggtttactccattgaattcacagtctgttgaagcacgtcttgaaacg ctgcgcacccaactccgctatcacgagcacaagtatcacgtggaggatgcgccggaaatt cccgatgcggaatacgaccgtctgatgcgtgagctaaaagcgctggagcaggaacatccg gcgctgatcacgcctgactcgccgacgcagcgagtgggggcggagccgctggcggcgttt gagtcggtgcggcacgaagtgccgatgctgtcgctggacaacgttttcgacgagcaaagt tttttggcgttctgcaagcgtatcaacgaccgcctgaaacatgcggacgatctctcattc tgctgtgaactgaaactggatggattggcggtcagcctgctgtatgaagacggcgtgctg gtacgcgccgccactcgcggcgacggggcgacgggggagaacatcacctcgaatattcgc accatcggcgcgatcccgctgcggctcagcggggacgctatcccgcgtcggctggaagtg cgcggcgaagtctttatgacgcacagcggctttgaggcgctgaacgaggacgcgcgtcgt acgggcggcaaggtgtttgccaacccgcgcaacgccgccgccggttcgctgcgtcagttg gacccgcgtattacggcgaaacgtccgctgacctttttctgctacggcgtcgggttgatt gaagacggcgagctgcctgactcccactgggaacgactgcaacgcttcaagtcctgggga ctgccggtcagcgaccgtattcgtcgatgctgcggcagcgatgccgtgctggacttttat cgtcaggtggaagagacgcgcagcgatctgggattcgatatcgacggcgtggtcatcaaa gtcgacgatctcgcgctgcaagagcgtcttggctttgttgcccgcgcgccgcgctgggcg gtggcctacaagtttccggcgcaggagcaactgacctggctgcgcgacgtggagtttcag gttggccgcaccggggcgattacgccggttgcgcggctggagccggtggccgtcgcgggt gtgatggtcagcaatgcgacgctgcacaacgccgatgaaatcgaccgtctgggcattcgc atcggcgaccgcgtgacggtacgccgcgccggagacgtcattccgcaaattgtcagcgtc gtgctgacggaacgtccggaagaaacgcagcctatcgctttccctgaccaatgtccggtc tgcggttccgacgtcgagcgagtggaaggcgaagcggtaacccgctgcaccggcggcctg ttctgcggcgcgcagcgtaaagaggcgctgaagcattttgtctcccgccgggcgatggac gtcgatggtatgggcgacaagatcatcgatcagctggtggaaaaagagtacgtgcatacc cctgcggacctgttccgcctgacggcgggcatcctcaccgggctggaccgcatggggccg aagtcggcgcagaatttggtgaacgcgctggagaaagccaagtcgaccaccttcgcccgt ttcctttatgccttgggcatccgggacgtcggcgaggcgaccgcggcgagtcttgctgcg catttcctgacgcctcaggcgctgtctgatgccgatctggaggcgttgcagcaggtgcag gatgtcgggattgtcgtcgcgacgcgtgtccgcaatttcctggatgaagagcacaaccag caggtgatccgggagctgatcgacgagattggcattcattggcccgaaccggttgtcgtc gatgtggacgaatcttccagcccgttcgccggtaaaacgctggtattgacgggctcgtta agcgtcttgtcgcgcgacgaagcgaaagatcgcctgacggcgctcggtgcgaaggttagc ggcagcgtatcgaaaaaaaccgatatggtgatcgcgggcgaagcggcggggtcgaaactg accaaagcacagtcgctgggcattccggtgatcgatgaggcggaaatgatgcgcctgctg gagcaataa

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