Lonsdalea britannica: CKQ53_09815
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Entry
CKQ53_09815 CDS
T05623
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lbq
Lonsdalea britannica
Pathway
lbq01501
beta-Lactam resistance
lbq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lbq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CKQ53_09815
01503 Cationic antimicrobial peptide (CAMP) resistance
CKQ53_09815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lbq03036
]
CKQ53_09815
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lbq02000
]
CKQ53_09815
01504 Antimicrobial resistance genes [BR:
lbq01504
]
CKQ53_09815
Chromosome and associated proteins [BR:
lbq03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
CKQ53_09815
Transporters [BR:
lbq02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CKQ53_09815
Antimicrobial resistance genes [BR:
lbq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CKQ53_09815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
HH_MFP_RND
RND-MFP_C
Beta-barrel_RND_2
YknX_C
BSH_CusB
HH_CzcB
HH_AAEA_pHBA
HH_EMRA
HH_YBHG
BSH_CzcB
Motif
Other DBs
NCBI-ProteinID:
AXW88809
UniProt:
A0AAD0SK87
LinkDB
All DBs
Position
complement(2153991..2155178)
Genome browser
AA seq
395 aa
AA seq
DB search
MNKNRRLLPLAAVLMLSGGLVLTGCDNKGESQGSAAGSAPAVDIVTIKAQPLNIITELPG
RTNSFRVAEVRPQVGGIILKRNFVEGGDVQAGVSLYQIDPAPYQAQLNSAKGTLAEAQAN
AEVARLTVNRYKPLLGTNYISKQEYDQAVATSRQADATVVSGKAAVDSAKINLDYTKVTA
PISGRIGKSTVTEGALVSSAQTTALTTIQQLDPIYVDVTQSSNDFLRLKNDLKSGTIQAA
NGKANVRLLLENGTEYDQQGTLEFSDVTVDETTGSITLRAIFPNPSHNLLPGMFVRARLD
AGVNQNAILVPQEGVTRTPRGDASALVVGEGDKVEVRTVTTAQAIGDKWVVTSGIKTGDR
VIVSGLQKIKPGMVVTAQEVKSDNTQQPQTQPAKS
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaacagaaggcttttgcctctggcggcggtgctgatgctttctggcggctta
gtacttacgggatgtgataataaaggtgagagtcaaggcagcgcggcaggaagcgctccg
gcggtagatattgtaactataaaagcacaacctctgaatatcatcaccgaactgccggga
cgtaccaactctttccgcgtagctgaagtccgccctcaggtcggcggcataattcttaaa
cgtaacttcgtggaaggcggcgacgtccaggctggcgtatcgctgtaccaaatcgatccg
gctccgtatcaggctcagcttaacagtgcgaaaggaacgctggcggaagcacaggctaac
gccgaagtcgcgcgtttgaccgtcaaccgttacaaaccgctgctcggcaccaactacatc
agcaagcaggaatacgaccaggccgtcgccacctcccgtcaggctgacgccacggtcgtt
tccggtaaagccgccgtagactctgccaaaatcaacctcgattacactaaagtcactgcg
ccgatttcaggccgaattggtaagtccacggtcaccgaaggcgccttggtttccagcgcg
cagacaaccgcgctcaccaccattcagcagctcgatcccatttatgtcgacgtcacacag
tccagcaatgattttttgcggctcaagaatgatttgaaaagcggcacgattcaggctgct
aacggcaaagccaatgtccgcctgttgctggaaaacgggaccgaatacgatcagcagggt
acgctggaattctctgatgtgaccgtcgatgaaacgaccggctccatcactctgcgcgcc
attttcccgaacccttctcacaacctgctgcctgggatgttcgtccgtgctcgtctggat
gcaggcgttaatcaaaatgcgattctggtccctcaggaaggcgtcacccgtacaccgcgc
ggcgatgcttccgcactggtcgtgggtgaaggggataaagttgaagttcgcactgtcact
acggcccaggccattggcgacaagtgggtcgtgacctcaggcattaaaaccggcgatcgc
gtgattgtttccggcttgcaaaagatcaaacccggtatggtggtgacagctcaggaagtc
aaatcggacaacactcagcagccccaaacccaacccgccaagtcttaa
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