Lonsdalea britannica: CKQ53_11075
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Entry
CKQ53_11075 CDS
T05623
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lbq
Lonsdalea britannica
Pathway
lbq01501
beta-Lactam resistance
lbq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lbq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CKQ53_11075
01503 Cationic antimicrobial peptide (CAMP) resistance
CKQ53_11075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lbq03036
]
CKQ53_11075
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lbq02000
]
CKQ53_11075
01504 Antimicrobial resistance genes [BR:
lbq01504
]
CKQ53_11075
Chromosome and associated proteins [BR:
lbq03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
CKQ53_11075
Transporters [BR:
lbq02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CKQ53_11075
Antimicrobial resistance genes [BR:
lbq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CKQ53_11075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
YknX_C
BSH_CzcB
BSH_CusB
Beta-barrel_RND_2
HH_YBHG
BSH_YknX
DUF7507
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
AXW87470
UniProt:
A0AAD0WL78
LinkDB
All DBs
Position
complement(2436602..2437723)
Genome browser
AA seq
373 aa
AA seq
DB search
MQLRMLCLLTLIGLSGCDNSQTQTESAAPTEVGIVTLKPTTFTLESELTGRTAATLTSDV
IPQVGGIIQKRLFTEGDEVKAGQPLYQIDPSSYKATYDQAAAALQSAKALVLSDCLKAKR
YAGLVKEQGVSQQDADDARSTCEQDKASVLEKNAALESARINVQWTTVTAPIAGRIGISS
VTPGALVTAQQSTALTTIRALNTMYLDLTRSSADLLRLRKQALATNSDTLNVTLTLEDGT
VYPHKGRLELTEVAVDESTGSVTLRSVFPNPDHVLLPGMFVRAKVDEGVMQDAILAPQQG
ITRDVKGNATALVVTADNKVERRAVVTAEATGSDWLITSGLKSGDRLLVEGSDKVAVGST
VNPVEVQLTGGAN
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgcagttacgcatgttatgccttttgacattgataggtttgagcggttgcgacaacagt
caaacgcaaaccgaaagcgccgcgccgaccgaagtcggcatcgtgacgttgaaacccacc
acgtttacgctggaaagcgaattaaccggccgcaccgccgcgacactgacgtctgacgtc
atccctcaggtcggcggcattattcaaaagcgtctgtttaccgaaggcgatgaggtgaaa
gccggtcagccgctgtatcagatcgacccctccagctataaggcgacctacgatcaggcc
gccgccgcgttgcagagcgccaaggcgctggttttgtccgactgtctgaaagccaaacgc
tacgccgggctggtcaaagaacagggcgtgtcgcagcaggatgcggatgatgcccgttcc
acctgtgagcaggacaaggccagcgtactggagaaaaatgccgcgctggaaagcgcccgc
atcaacgtgcagtggaccacggtgacggcgcctatcgccggacgcatcggtatttccagc
gttacgccgggggcgttggtgaccgcgcagcagtctaccgcgctcaccacgatccgtgcg
ctgaacacgatgtatttggatctgacccgttccagcgccgacctgctgcgcctgcgcaaa
caggcgctggcgaccaacagcgatacgctgaacgtgaccctgacgctggaagacggaacg
gtctacccgcataaagggcgtctggagctgacggaagtcgccgtcgacgaatccaccgga
tccgttacgctgcgctccgtgttccccaaccctgaccacgtgctgcttcccggcatgttt
gtccgcgcgaaagtggatgaaggcgtgatgcaggacgccatactggcgccccagcagggc
attacccgcgacgtgaaaggcaacgcgacggcgttggtcgtgacggccgacaacaaggtg
gaacgtcgcgccgtcgtgacggcggaagccaccggcagcgattggttgattaccagcggt
ttgaaaagcggtgatcgcctgttggtggaaggcagcgacaaggtcgcggtaggcagtacg
gttaaccccgtcgaagtgcaactgacgggaggcgctaactga
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