Lonsdalea britannica: CKQ53_15410
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Entry
CKQ53_15410 CDS
T05623
Symbol
rumB
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
lbq
Lonsdalea britannica
Brite
KEGG Orthology (KO) [BR:
lbq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbq03009
]
CKQ53_15410 (rumB)
Enzymes [BR:
lbq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
CKQ53_15410 (rumB)
Ribosome biogenesis [BR:
lbq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CKQ53_15410 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Methyltransf_12
Cons_hypoth95
UPF0020
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
AXW88222
UniProt:
A0A1X3RUW3
LinkDB
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Position
complement(3373952..3375082)
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AA seq
376 aa
AA seq
DB search
MDCARYNDGSCRSCQWLEKEYPQQLEDKQQHLNELLVDHPVRQWLPAFPSPLAAFRNKAK
MVVSGSVERPLLGVLHRDGTPVDLCDCPLYPDSFQPIFAVLKTFIARAGLTPYQVARRRG
ELKYLLLTESRLNGQCMLRFVLRSETKLDQLRAALPWLQEQLPQLTVISANIQPVHQAIM
EGDREIPLSRQQVLEEAFNQIPLAIRPHSFFQTNPDVAAALYDTARRWVRELPVHSLWDL
FCGVGGFGLHCATPEMTLTGIEISAEAIACARRSAEQLGLEKVHFEALDSTRFATGEGAV
PDLVIVNPPRRGIGEDLCQYLSRMAPPYILYSSCNAQSMAKDMSRLPDYRAEQIQLFDMF
PHTAHYEVLTLLKRVA
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggattgcgcccgctacaacgacggctcctgccgttcctgccaatggttggaaaaagag
tatccgcagcagttggaagacaaacagcagcacttgaatgaattgctggtcgaccatccg
gttcgtcagtggctccctgcatttccgtcgccgctcgcggcttttcgcaacaaagccaaa
atggtggtgagcggcagcgtcgaacgaccgctattgggcgtattacatcgtgacggcact
cccgtcgatctgtgcgattgcccgctttatcccgacagtttccaacctatcttcgcggta
ttgaagacgtttattgcacgggcgggattaacgccctatcaggtcgcccgtcggcgcggc
gaactgaaatacctgctgctgacggaaagtcggttgaacggtcaatgtatgctgcggttt
gttttgcgctcggaaaccaagttggatcaactgcgcgcggcgctgccgtggttacaggaa
cagctgccgcagctgaccgtgatctcggcgaatatccagccggtgcatcaggcgatcatg
gaaggtgaccgagagattccgctgagtcgacagcaggtgttggaggaagcgttcaatcag
ataccgctcgccatccgtcctcacagtttctttcaaactaatcctgacgtggccgccgcg
ttatacgataccgcgcgacgttgggtgcgcgagctaccggttcacagcctgtgggatctg
ttttgcggtgtcggcggcttcgggcttcactgcgcaacgccggagatgacgctgaccggc
attgaaatcagcgctgaagccatcgcctgcgcgcgacgctccgccgagcagctcggtctg
gagaaggttcacttcgaggcgctcgattcgacgcggttcgcgaccggggaaggggccgtg
ccggatttggtgattgtgaacccgcctcgtcgcggtattggggaagatctctgccagtac
ctcagccggatggcgccgccgtacatcctgtactccagctgtaatgcgcaaagcatggcc
aaggatatgtcgcgtctaccggactatcgcgccgagcaaattcagctgttcgatatgttc
ccgcataccgcgcattatgaagtgctgaccttgctgaagcgggtggcgtga
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