Lichenostomus cassidix (helmeted honeyeater): 146430048
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Entry
146430048 CDS
T12101
Symbol
TRAF2
Name
(RefSeq) TNF receptor-associated factor 2 isoform X2
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
lcai Lichenostomus cassidix (helmeted honeyeater)
Pathway
lcai04010
MAPK signaling pathway
lcai04137
Mitophagy - animal
lcai04141
Protein processing in endoplasmic reticulum
lcai04210
Apoptosis
lcai04217
Necroptosis
lcai04621
NOD-like receptor signaling pathway
lcai04622
RIG-I-like receptor signaling pathway
lcai04920
Adipocytokine signaling pathway
lcai05132
Salmonella infection
lcai05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lcai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
146430048 (TRAF2)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
146430048 (TRAF2)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
146430048 (TRAF2)
09143 Cell growth and death
04210 Apoptosis
146430048 (TRAF2)
04217 Necroptosis
146430048 (TRAF2)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
146430048 (TRAF2)
04622 RIG-I-like receptor signaling pathway
146430048 (TRAF2)
09152 Endocrine system
04920 Adipocytokine signaling pathway
146430048 (TRAF2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
146430048 (TRAF2)
09171 Infectious disease: bacterial
05132 Salmonella infection
146430048 (TRAF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcai03019
]
146430048 (TRAF2)
04121 Ubiquitin system [BR:
lcai04121
]
146430048 (TRAF2)
Enzymes [BR:
lcai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
146430048 (TRAF2)
Messenger RNA biogenesis [BR:
lcai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
146430048 (TRAF2)
Ubiquitin system [BR:
lcai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
146430048 (TRAF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
Sina_ZnF
zf-C3HC4_2
zf-C3HC4_4
zf-RING_6
zf_C2HC_14
SLX5_C
zf-C3HC4_5
zf-TRAF_2
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
146430048
NCBI-ProteinID:
XP_084932677
LinkDB
All DBs
Position
17:10642161..10670727
Genome browser
AA seq
502 aa
AA seq
DB search
MKNHPHAIIIKWGKYFYFQSLEIQTELLVHMAAANSSPPGSLDLNQPGFAKEILGTKLEV
KYLCSDCKNILRRPFQAQCGHRYCSYCLKKIISAGPQKCASCIQEGIYEEGISILETSSA
FPDNAARREVESLPAVCINSGCTWKGTIKEYEAHDEVCPEFPLTCEGCGKKIPREKFRDH
VKTCGRSKVPCRFEAVGCTEVVENEKLLEHESKCLAEHLYMLLSSVLSLKDGAGDPKPFP
VLSSSQNSSPLLAANSLCSESELSRSLELLGRCEALERKTVTFENIVCVLNREVERVSLT
AEAYSRQHRLDQEKIETLSNKVRQLERSIGLKDLAMAEMEEKIRSMEASTYDGVFIWKIT
EFARKRQEAITGRSPAIFSPAFYTSKYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPND
ALLRWPFNQKVTLMLLDQNNREHIIDAFRPDVTSSSFQRPVTEMNIASGCPLFCPVSIME
AKNSYVRDDAIFIKAIVDLTGL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcacccccatgcaattataatcaaatggggaaaatacttttattttcagtct
ctggagatacagacagagcttttagttcacatggcagcagcaaactcttctccacctggt
tctttggatctaaaccagcctggatttgcaaaggagatcctgggaactaaactggaggtc
aaatacctctgctccgattgcaagaacattctgaggcggccgttccaggcacagtgtggc
catcgctactgctcatactgcctgaagaaaataatcagtgctggacctcaaaagtgtgcc
agctgtatccaggaaggaatatacgaagaaggaatttctattttggaaacaagctcggct
ttcccagacaatgcggcccggcgggaggtggagagtctgcctgctgtctgcatcaacagt
ggctgcacctggaagggaaccatcaaagagtacgaggctcatgatgaagtctgccctgaa
ttcccgctgacttgcgaaggctgtgggaagaagattcctagggaaaagtttcgagaccat
gtgaagacctgtggcagatccaaagtaccttgccggtttgaggctgtgggctgtacagag
gtggtggaaaatgaaaagctcctggaacatgaaagcaagtgtttggcagagcatctctat
atgctgctgagctctgtgctcagcctcaaggatggtgctggggacccgaagccctttcct
gtcctttcctcatcacaaaacagctccccactgctggcagcaaactcgttgtgctcagag
tccgagctctcccggtccctggagctcttgggaaggtgtgaggccctcgagaggaaaaca
gtgacctttgagaacattgtctgcgtgctcaaccgggaggtggagagagtgtccctgaca
gccgaagcctatagccgccagcaccggctggatcaggagaaaattgaaacactgagcaac
aaggtccggcagctggagaggagcattgggctcaaggacctggccatggctgagatggag
gagaagatccgcagcatggaggcttccacctatgacggggttttcatctggaagataacg
gagtttgcccggaagcgtcaggaggcgataacaggccgctctcctgccatcttctctcca
gctttctacaccagcaagtatggctacaagatgtgtctgcgtgtgtacctgaacggggac
ggcactgggcgcgggacccacctatccttgttttttgtggtgatgaaaggacctaacgac
gcactgctgcggtggcccttcaaccagaaggtcaccctgatgctcctggaccagaataac
cgggagcatatcatcgatgccttccgccctgatgtgacttcctcctccttccagcgccct
gtcacagagatgaacatcgccagtggctgccccctcttctgtcctgtctccatcatggaa
gccaagaactcctacgtgcgtgatgatgccatctttattaaagccatcgttgatctcaca
ggcctctaa
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integrated database retrieval system
