Lysinibacillus capsici: ICJ70_17725
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Entry
ICJ70_17725 CDS
T08448
Symbol
vanR
Name
(GenBank) VanR-ABDEGLN family response regulator transcription factor
KO
K18349
two-component system, OmpR family, response regulator VanR
Organism
lcap
Lysinibacillus capsici
Pathway
lcap01502
Vancomycin resistance
lcap02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lcap00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ICJ70_17725 (vanR)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
ICJ70_17725 (vanR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lcap02022
]
ICJ70_17725 (vanR)
01504 Antimicrobial resistance genes [BR:
lcap01504
]
ICJ70_17725 (vanR)
Two-component system [BR:
lcap02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
ICJ70_17725 (vanR)
Antimicrobial resistance genes [BR:
lcap01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
ICJ70_17725 (vanR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
GerE
KaiA_N
cREC_REC
Motif
Other DBs
NCBI-ProteinID:
UNT54347
LinkDB
All DBs
Position
complement(3466475..3467161)
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AA seq
228 aa
AA seq
DB search
MNILVVDDEKEIADLIELYLKNENYHVFKFYTAQEALACIEHEKVDLAVLDIMMPDIDGF
TILRKIRETLNFPVIMLTAKEEEIDKINGFSLGADDYITKPFRPLELVARVKAQIRRFTF
YNQGSKQQEDIIDFAGLVINKNTRQVFLNERPISLTPTEFAILWYLCANRGTVISSEQLF
QEIWGEKYFSSNNTVMVHIRHLREKMKDAAENPKYIKTVWGVGYTIEK
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
ttgaatattttagttgttgacgatgaaaaggaaattgcagatttaatagaactttactta
aaaaatgaaaactatcatgtatttaagttttatacagctcaagaggctttggcatgtatt
gagcatgagaaagtagatttagctgttctggatattatgatgcctgatatagatggcttt
actattttacgaaaaatccgagaaacattgaattttccagtgataatgcttacggcaaag
gaagaagaaatcgataaaataaatggcttttctctgggagcagatgattatataacaaag
ccatttcgtccattagagttggttgctcgtgtaaaggcacaaatacgaagatttactttc
tacaaccaaggttcgaagcagcaagaagatatcattgattttgctggcttggtgattaat
aaaaacacacgacaagtctttttaaatgaaaggcccatatcccttacacctacggaattc
gctattctttggtatttatgcgcaaatcgagggacagttattagctcagagcaattattc
caagaaatttggggggaaaagtactttagcagcaataacacggtaatggttcacattcga
catttacgggaaaaaatgaaggatgctgcggagaacccaaagtatattaaaacggtttgg
ggagtggggtataccattgaaaaatga
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