Lemur catta (Ring-tailed lemur): 123620520
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Entry
123620520 CDS
T08326
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
lcat
Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcat04040
]
123620520 (SCN4A)
Ion channels [BR:
lcat04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
123620520 (SCN4A)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
123620520
NCBI-ProteinID:
XP_045381770
LinkDB
All DBs
Position
15:complement(44178643..44222433)
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AA seq
1825 aa
AA seq
DB search
MARPSLATVVPLGPECLRPFTRESLVAIEQRAAEEVARKERNKQMEIEEAERKPRSDLEA
GKNLPLIYGDPPPEVIGIPLEDLDPYYSDKKTFIVLNKGKAIFRFSATPALYLLSPFSLV
RRGAIKVLIHSLFSMFIMITILTNCVFMTMSDPPPWSKDVEYTFTGIYTFESLIKMLARG
FCIDDFTFLRDPWNWLDFSVIMMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRHKCVRWPPPFNDTNTTWYGNDTW
YSNDTWYSNDTWYGNDSWASNYTFDWDAYISDEGNFYFLEGSNDALLCGNSSDAGHCPEG
YECIKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVIIF
LGSFYLINLILAVVAMAYAEQNEATLAEDQEKEEEFQQMLEKFKKHQEELEKAKAAQALE
GGEADGDPAHGCNGSLDASPGEKGAPRPSGSADSAISDAMEELEEAHQKCPPWWYKCAHK
LLIWNCCIPWVKFKNIVHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEQFDNVLTVGN
LVFTGIFTAEMVLKLIAMDPYEYFQQGWNVFDSIIVTLSLVELGLANVQGLSVLRSFRLL
RVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIA
SDCSLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQPLCLTVFLMVMVIGNLVVL
NLFLALLLSSFSADSLAASDEDGEMNNLQIAIGRIKWGIGFAKAFLLGLLHGKLLSPRDI
MLSLGKPGDAEEAGEAGESAPEDEKKELPPEEDLKKDNHILNHVGLVDGPPSSIELDHLN
FINNPYLTIQVPIASEESDLEMPTEEETDTFSEPEDSKKPLQPLYDGNSSVCSTADYKPP
EEDPEEQAEENPEGEEPEECFTEACVQRYPCLYVDISQGRGKKWWTLRRACFKIVEHNWF
ETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFILEMLLKWVAYGFKVYF
TNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNAL
LGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCMNTTTSERFDISEVNNKSECESLM
HTGQVRWLNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREQEEQPQYEVNIYMYL
YFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQK
PIPRPQNKIQGMVYDFVTKQVFDITIMILICLNMVTMMVETDDQSQLKVDILYNINMVFI
IVFTGECVLKMFALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLA
RIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKESGI
DDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPTLENPGTSVKGDCGNPSI
GICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLGEDDFEMFYETWEKFDPDATQ
FIAYSLLSDFVDTLQEPLRIAKPNKIKLITLDLPMVPGDKIHCLDILFALTKEVLGDSGE
MDALKQTMEEKFMAANPSKVSYEPITTTLKRKQEEVCAIKIQRAYRRHLLQRSVKQASYM
YRHSQDGNGDGAPEKEGLIASTMNKMYGRENGNGNRSVHSEGDKGLAGDAVPALGLTPVS
PSDAALPPSPPPGQTVRPGVKESLV
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
atggccagaccgtctctggcaaccgtggtccctctgggccccgaatgcctgcgccccttc
acccgggagtccctggtggccatagagcagcgggcggcggaggaggtggcgcggaaggag
cggaacaagcagatggagattgaggaggctgaacggaagccgcgcagcgacctggaggcc
ggcaagaacctgccccttatctatggggaccccccaccggaggtcatcggcatccccctg
gaggacctggacccctactacagcgacaagaagaccttcatcgttctcaacaagggcaag
gccatcttccgcttctctgccacgcctgccctctacctgctgagccccttcagcctcgtc
aggcgcggtgccatcaaggtgctcatccactcgctgttcagcatgttcatcatgatcacc
atcttgaccaactgtgtgttcatgaccatgagtgacccgcctccctggtccaaggacgtg
gagtacaccttcacagggatctacacctttgagtccctcatcaagatgctggcccgaggc
ttctgcatcgatgacttcacattcctccgggacccctggaactggctggacttcagcgtc
atcatgatggcgtacctgacggagtttgtggacttgggcaacatctcagccctgaggacc
ttccgggtgctgcgggctctgaaaaccatcacggtcatcccagggctgaagacgatcgtg
ggggccctgatccagtcggtgaaaaagctgtcggatgtgatgatcctcactgtcttctgc
ctgagtgtctttgccctggtggggctgcagctcttcatggggaacctgcggcacaagtgt
gtgcgctggccaccgcccttcaacgacaccaacaccacatggtacggcaacgacacgtgg
tacagcaatgacacgtggtacagcaatgacacgtggtacggcaacgacagctgggccagc
aactacacctttgactgggacgcctacatcagtgacgaagggaacttctacttcctggag
ggctccaacgatgccctgctctgtgggaacagcagtgacgctgggcactgccccgagggt
tatgagtgcatcaaggccgggcggaatcccaactatggctacaccagctacgataccttc
agctgggccttcctggctctcttccgcctcatgacacaggactattgggagaacctcttc
cagctgacccttcgagcagccggcaagacctacatgatcttcttcgtggtcatcattttc
ctgggctccttctacctcatcaatctgatcctggccgtggtggccatggcctacgccgag
cagaacgaggccaccctggcggaggatcaggagaaagaggaggagtttcagcagatgctc
gagaaattcaagaagcaccaggaggagctggagaaggccaaggccgcccaggctctggaa
ggtggggaggcagatggggacccagcccatggctgcaatggcagcctggacgcatcgcct
ggggagaagggagccccgaggccgagcggcagtgcagacagcgccatctcggatgctatg
gaagagctggaagaggcccaccagaagtgcccaccatggtggtacaagtgtgcccacaaa
ctgctcatatggaactgttgcattccatgggtgaagttcaagaacatcgtccacctgatt
gtcatggaccccttcgtggacctgggcatcaccatctgcatcgtgctcaacaccctcttc
atggccatggaacattatcccatgacagagcagtttgacaacgtgctcactgtgggcaac
ctggtcttcacaggcatcttcacagcagagatggtgctgaagctgatcgccatggacccc
tacgagtacttccagcagggctggaacgtcttcgacagtatcatcgtcaccctcagcctg
gtggagctgggcctggccaacgtgcaggggctgtccgtgctccgctccttccgtctgctg
cgggtcttcaagctggccaagtcgtggccgacgctgaacatgctcatcaagatcattggc
aactcggtgggggcgctgggcaacctgacgctggtgctggccatcatcgtgttcatcttc
gcggtggtgggcatgcagctgttcggcaagagctacaaggagtgcgtgtgcaagatcgcc
tccgactgcagcctgccgcgctggcacatgcacgatttcttccactccttcctcatcgtc
ttccgcatcctgtgtggggagtggatcgagaccatgtgggactgcatggaggtggccggc
cagcccttgtgcctcaccgtcttcctcatggtcatggtcatcggcaacctggtggtcctg
aacctgttcctggctctgctgctgagctccttcagcgctgacagcctggcggcctcggac
gaggacggcgagatgaacaacctgcagatcgccatcgggcgcatcaagtggggcatcggc
ttcgccaaggccttcctgctgggcttgctgcacggcaagctcctgagccccagggacata
atgctcagcctcgggaagcccggggacgccgaggaggccggagaggccggggagagcgcc
cccgaggacgagaagaaggagctgccacctgaggaggacctgaagaaggacaatcacatc
ctgaaccacgtgggcctggtggacggccctccctccagcatcgagctggaccacctcaac
ttcatcaacaacccctacctgaccatacaggtgcctatcgcctccgaggagtccgacctg
gagatgcccacggaggaggaaaccgacactttctcggagcctgaggacagcaagaagccg
ctgcagcccctctacgatggcaactcctccgtctgcagcacggcggactacaagcccccc
gaggaggaccctgaggagcaggcagaggagaaccccgagggggaggagcccgaggagtgc
ttcactgaggcctgtgtgcagcgctacccctgcctctacgtggacatctcccagggccgc
gggaagaagtggtggaccctgcgcagggcctgcttcaagatcgtcgagcacaactggttc
gagaccttcattgtcttcatgatcctgctcagcagtggggccctggccttcgaggacatc
tacatcgagcagcggcgagtcatccgcaccatcctagagtacgccgacaaggtcttcacc
tacatcttcatcctggagatgctgctcaagtgggtggcctacggcttcaaggtgtacttc
accaacgcctggtgctggctcgacttcctcatcgtggacgtctccatcatcagcctggtg
gccaactggctgggctactcggagctgggacccatcaaatccctgcggacacttcgggcc
ctgcggcccctgagggcgctgtcccgattcgagggcatgagggtggtggtgaacgccctc
ctgggcgccatcccctccatcatgaacgtgctgctcgtctgcctcatcttctggctcatc
ttcagcatcatgggtgtgaacttgtttgccggcaagttctactactgcatgaacaccacc
acctccgagcggtttgacatctccgaggtcaacaacaagtccgagtgcgagagcctcatg
cacacgggccaggtccgctggctcaacgtcaaggtcaactatgacaacgtgggtctgggc
tacctctccctcctgcaggtggccacgttcaagggttggatggacatcatgtatgcagcc
gtggactcgcgggagcaggaggagcagccacagtatgaggtgaatatctacatgtacctc
tacttcgtcatcttcatcatcttcggatccttcttcaccctcaacctcttcatcggcgtc
atcattgacaacttcaaccagcagaagaagaagtttggagggaaagacatcttcatgaca
gaggaacagaagaaatactataacgccatgaagaagcttggctccaagaagccgcagaag
ccaattccccggccccagaacaagatccagggcatggtgtatgacttcgtgacgaagcag
gtgtttgacatcaccatcatgatcctcatctgcctcaacatggtcaccatgatggtagag
acggacgaccagagccagctcaaggtggacatcttgtacaacatcaacatggtcttcatc
atcgtcttcacgggcgagtgtgtgctcaagatgttcgccctgcggcagtactacttcacc
gtcggctggaacatcttcgactttgtggttgtcatcttgtccattgtgggcctcgcgctc
tccgacctgatccagaaatacttcgtgtcgcccacgctgttccgtgtgatccgcctggcg
cggattgggcgtgtcctgcggctgatccgcggggccaagggcatccggacgctgctgttt
gccctcatgatgtcgctgcctgccctcttcaacatcggcctcctcctcttcctggtcatg
ttcatctactccatcttcggcatgtccaactttgcctacgtcaagaaggagtcgggcatc
gatgacatgttcaactttgagacctttggcaacagcatcatctgcctcttcgagatcacc
acgtcagccggctgggacgggctcctcaaccccatcctcaacagcgggccccccgactgt
gaccccaccctggagaacccaggcaccagcgtcaagggggactgcggcaacccctccatc
ggcatctgcttcttctgcagctacatcatcatctccttcctcatcgtggtcaacatgtac
attgccatcatcctggagaacttcaacgtggccaccgaggagagcagtgagcccctgggc
gaggacgacttcgagatgttctatgagacgtgggagaagttcgaccccgacgccacccag
ttcatcgcctacagcctcctctctgacttcgtggacaccctgcaggagccgctgaggatc
gccaagcccaacaagatcaagctcatcacactggacctgcccatggtgccgggggacaag
atccactgcctggacatcctcttcgccctgaccaaagaggtcctgggtgactctggggaa
atggacgccctcaagcagaccatggaggagaagttcatggcggccaacccctccaaggtc
tcctacgagcccatcaccaccaccctgaagaggaagcaggaggaggtgtgcgccatcaag
atccagagggcctaccgccggcacctgctgcagcgctctgtgaagcaggcgtcctacatg
taccgccacagccaggacggcaatggtgacggggcccctgagaaggaggggctgatcgcc
agcactatgaacaagatgtatggccgtgagaacgggaacgggaacagaagtgtgcacagc
gagggggacaagggcttggctggggacgctgtacctgccttggggctcacgccggtcagc
ccctcagatgccgccctgcctccgtccccaccaccggggcagacggtgcgcccaggggtc
aaggagtctcttgtctag
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integrated database retrieval system
