Lemur catta (Ring-tailed lemur): 123620671
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Entry
123620671 CDS
T08326
Symbol
SMG6
Name
(RefSeq) telomerase-binding protein EST1A isoform X1
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123620671 (SMG6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcat03019
]
123620671 (SMG6)
03032 DNA replication proteins [BR:
lcat03032
]
123620671 (SMG6)
Messenger RNA biogenesis [BR:
lcat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
123620671 (SMG6)
mRNA cycle factors
Common to processing body (P body) and stress granule
123620671 (SMG6)
DNA replication proteins [BR:
lcat03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
123620671 (SMG6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
PIN_9
MCD_N
Motif
Other DBs
NCBI-GeneID:
123620671
NCBI-ProteinID:
XP_045382069
LinkDB
All DBs
Position
15:16093193..16306173
Genome browser
AA seq
1419 aa
AA seq
DB search
MAEGLERVRISASELRGILATLAPQAGSRENMKELKEPRQRKDNRRPDLEIYKPGLSRLR
NKPKIKEPSGSEEFKDEIVNDRDSSAVGNGTQLIKDGCKELDNQQPNGPVDPENNQGQES
FPRIAGQEDRSLRIIKRTKKPDLQIYQPGRRLQTVNKESASRVDEEEILNQVEQLKVEED
ECRGHVVKEEVVNKPDRAETERSPNGDRVRAAKAEKGKRIEKGEGMKKANDDPAQGKPGS
AKRYSRSDKRRNRYRTCSTSSAGSNNSAEGAGLADNGCRRRRQDRTKERPRLKKQVSMSS
TDSLDEDKIDEPNGLGPRRSSERKKHLERNWSGRGDSEQKSNGKENRGTLRVTFDAETMN
KDSPMVRSAREDVDKIKPDKGSSSGGKVSEKQVSKNLEQELRGRGRGILILPAHTTLSVN
SAGSPESTPLGPRLLFGSGSKGSRNWGRGGTTRRLWDPNNPDQKPALKSQVPQLHFLDTD
DEVSPTSWGDSRQAQASYYKFQNSDNPYYYPRTPGPASQYPYTGYNPLQYPVGPTNGMYP
GPYYPGYPTPSGQYVCSPLPASTMSPEEIEQHMRNMQQQELHRLLRVADNQELQLSNLLS
RDRISPEGLEKMAQLRAELLQLYERCILLDIEFSDNQNVDQILWKNAFYQVIEKFRQLLK
DSNVENPEQIRNRLLELLDEGSDFFDSLLQKLQVTYKFKLEDYMDGLAIRSKPLRKTVKY
ALISAQRCMICQGDIARYREQANDTANYGKARSWYLKAQHIAPKNGRPYNQLALLAVYTR
RKLDAVYYYMRSLAASNPILTAKESLMSLFEETKRKAEQMEKKQHEEFELSPNQWQKGKK
STFRHVGDDTTRLEIWIHPSHPRSSQGTESGKDSEQENGLGSLSPSDLNKRFILSFLHAH
GKLFTRIGMETFPAVAEKVLKEFQVLLQHSPSPIGSTRMLQLMTINMFAVHNSQLKDCFS
EECRSVIQEQAAALGLAMFSLLVRRCTCLLKESAKAQLSSPEDQDDQDDIKVSSFVPDLK
ELLPSVKVWSDWMLGYPDTWNPPPTSLDLPSQVAVDVWSTLADFCNILTAVNQSEVPLYK
DPDDDLTLLILEEDRLLSGFVPLLAAPQDPCYVEKTSDKVIAADCKRVTVLKYFLEALCG
QEEPLLAFKGGKYVSVAPVPDTMGKEMGSQEGKQLEDEEEDVVIEDFEEDSEAEGSGGED
DIRELRAKKLALARKIAEQQRRQEKIQAVLEDHSQMRQMELEIRPLFLVPDTNGFIDHLA
SLTRLLESRKYILVVPLIVINELDGLAKGQETDHRAGGYARVVQEKARKSIEFLERRFES
RDSCLRALTSRGNELESIAFRSEDITGQLGNNDDLILSCCLHYCKDKAKDFMPTSKEEPI
RLLREVVLLTDDRNLRVKALTRNVPVRDIPAFLTWAQVG
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggggttggagcgtgtgcggatctccgcgtcggagctgcgagggatcctggcc
actctggctccgcaggccgggagcagagagaacatgaaggaattaaaggagcccaggcag
cgcaaagacaacaggcgtccagatctggaaatctataagcctggcctttctcgactaagg
aacaaacctaaaatcaaggagccctctgggagtgaggaatttaaggatgaaattgttaat
gacagagattcttctgctgttggaaatggtacacagcttattaaagatggctgcaaggaa
ctggacaaccaacagccaaatggtcctgtagacccagaaaataatcagggacaggaatcc
tttcctaggattgctggacaagaggatcgaagtctaagaattatcaagagaacaaagaaa
cctgacctgcagatctatcagcctggacggcgtttgcagactgttaacaaagaatcagct
agccgggtggatgaagaagaaatccttaaccaggtagaacaactgaaagtagaggaagat
gaatgtaggggacacgttgtgaaagaggaagttgtgaataaaccagacagagcagagaca
gaaaggagtccaaatggtgacagagtaagggctgcaaaggcagaaaaaggaaaaaggatt
gaaaaaggggaggggatgaagaaagcaaacgatgatccagcccaggggaagcctggttct
gcaaagcgctactcccgctcagacaaacgaaggaaccgttaccgcacttgcagtaccagc
tcagctggtagcaacaacagtgctgagggagctggcctggctgataacggatgtcgccgc
cggcgacaggataggaccaaggagaggccacgactgaagaagcaagtatctatgtcctca
actgactccttagacgaggacaaaattgatgagccaaatggattaggacccaggaggagc
tcagaaagaaagaaacatttagaaagaaactggtctggccgtggggacagtgagcagaaa
agcaatggtaaagaaaatcgaggtactcttcgtgtcacttttgatgcagaaaccatgaac
aaagattctcccatggtgaggtcagccagggaggatgtagataagataaagcctgacaaa
ggctcgagcagtgggggcaaagtatctgagaagcaagtgtccaaaaacctggaacaagaa
cttcggggtcgaggtcgtggcattctgattctgcctgcgcataccaccctatctgtcaat
tcagcaggttctccagagtctacacctttgggacctcggcttttatttggatctggtagt
aagggatctcggaattggggccgtggaggtaccacacgccgattgtgggacccaaacaat
cctgatcagaaacctgctctaaagagccaggtgccccagttacatttcttagacactgat
gatgaagtcagccctacatcttggggtgactcacgccaggcccaagcatcttactataag
tttcaaaactctgacaatccttattattacccccggacaccaggccctgcctcccagtat
ccctatacaggttataaccctctacagtacccagtgggtcctacgaatggtatgtaccca
gggccttactacccaggctatccaactccatcaggacagtatgtttgtagccctctccct
gccagcaccatgagtcctgaggagatagagcagcacatgaggaacatgcagcaacaggag
ctacataggcttctccgggtggctgacaatcaggaactgcagctcagcaacctgctctct
agggaccgcattagtcctgaaggcctggagaagatggctcagctcagagctgaactgctg
cagctatatgagcgctgtattctattagatattgagttctctgataatcagaatgtggat
cagatcctgtggaagaatgctttctatcaggtgattgagaagttcaggcagcttctcaag
gattcgaatgttgagaacccagaacagattcggaacagacttttggagctcttggatgag
ggtagtgacttctttgatagtttgcttcagaaactgcaggttacttacaagttcaaactg
gaggactacatggacggtcttgccattcgcagcaagccattacgcaagacagtaaaatat
gccttgatcagtgcccagcgctgtatgatttgccaaggagatattgctagatatcgggag
caagccaatgatacagcaaactatgggaaagcacgcagttggtacctgaaggcccagcac
attgctcccaagaatgggcgcccctataaccagttggctttgctggcagtatatacgagg
aggaagcttgatgctgtgtattactatatgcgcagtttagctgccagcaaccctattctg
actgccaaagagagtctcatgagcttgtttgaagagactaaacgaaaggcagaacagatg
gaaaagaagcaacacgaggagtttgaactgagccctaaccaatggcagaaaggaaagaag
tctactttccggcatgttggtgatgataccactcgcctggagatctggattcatccatcc
catccgcggtcctcccagggcactgagtctgggaaggattctgagcaggagaatgggctg
ggcagcctgagtcccagcgatctgaacaaaaggttcatcctcagttttctccatgcccat
gggaagctgtttacccggattgggatggagacattccctgcagtggctgagaaggtcctc
aaggagttccaggtgttgctgcagcatagcccctctcctattggaagtacccgtatgctg
cagcttatgaccatcaacatgtttgctgtgcacaactcccagttaaaagactgcttctca
gaggagtgtcgctctgtgatccaggagcaagctgcagccctgggcttggctatgttttct
ctactggtacggcgctgcacctgcttacttaaggagtctgccaaagctcagctgtcctct
cctgaggatcaggatgaccaagatgacatcaaggtgtcttcctttgtcccggacctgaag
gaactgctccccagcgtgaaagtctggtcagactggatgcttggctacccagacacctgg
aatcctccacccacatccctggacctgccctcacaggttgctgtggatgtgtggtcgacg
ctggctgatttctgtaacatactgactgcagtgaatcagtctgaggtgccactgtacaag
gacccggacgatgacctcacccttcttatcctggaagaggatcggcttctctcaggcttt
gtccccttgctggctgcccctcaggacccctgctacgtggagaaaacctcggataaggtt
attgcagctgactgcaaaagggtcacagtgctgaagtattttctggaagccctttgtgga
caagaagagcctctgctggcattcaagggtggaaaatatgtgtcagtggcacccgtccca
gacaccatgggaaaggaaatgggaagccaagagggaaaacaactggaagatgaggaggag
gatgtggtgattgaagactttgaggaagattcagaggctgaaggcagtgggggcgaggat
gacatcagagaacttcgggccaagaagctggctctggccaggaagatagctgagcagcag
cgtcgccaagaaaagatccaggctgtcctggaggaccacagtcagatgaggcagatggag
ctcgagatcagacccctgttccttgtaccagacaccaacggcttcattgaccacctggcc
agtctgacacggctgctggagagcaggaagtacatcctggtggtgccccttatcgtgatc
aatgagttggacggcctggccaaagggcaggagacagaccatcgagctgggggttacgcc
cgtgtggtacaagaaaaagcccgcaagtccatcgagttcctcgagcggcgatttgagagt
cgggactcttgcctacgggccctgaccagccgtggcaatgaacttgaatccatcgccttc
cgcagtgaggacatcactggccagctgggtaacaacgatgacctgattctttcctgctgc
ctccactactgcaaagacaaggcgaaggacttcatgcccaccagcaaagaggagccaatc
cggctactgcgggaggtggtgctgttgacggatgaccggaacctgcgtgtgaaagcgctg
acaaggaatgtgcctgtgcgggatatcccagccttcctcacatgggcccaggtgggctga
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integrated database retrieval system
