Lemur catta (Ring-tailed lemur): 123621055
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Entry
123621055 CDS
T08326
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123621055 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcat03041
]
123621055 (EFTUD2)
Spliceosome [BR:
lcat03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
123621055 (EFTUD2)
Complex C
U5 SnRNP specific factors
123621055 (EFTUD2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
123621055
NCBI-ProteinID:
XP_045382767
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All DBs
Position
15:41543179..41581039
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AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDDIGDHDDDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatactgacttgtatgatgagtttgggaattacattggaccagagctcgattctgat
gaagatgatgatgaattgggcagagagaccaaagatcttgatgagatggatgatgacgac
gatgatgatgacataggtgatcatgatgatgatcaccctgggatggaagtggtgctgcat
gaggacaagaagtactacccaacagccgaggaggtgtatggtcctgaggtggagaccata
gttcaggaggaagacacgcagcctctcacagaacccattattaagccagtgaaaaccaag
aaattcactctgatggagcagacattacccgtcacagtatatgaaatggatttcttggca
gacctgatggataactcagagctcatcagaaatgtgaccctttgtggccatctccaccat
ggcaagacgtgttttgtagattgtttaatcgagcagactcacccagaaatcagaaagcgc
tatgaccaagatctgtgctatactgacatcctcttcacagagcaagagagaggtgttggc
atcaaaagcactcctgtgacggtggtcttgccagataccaaaggaaaatcttacctattc
aatatcatggacaccccaggacatgtgaatttttctgatgaggtcacagctggcttgcgc
atctcagacggagtggtccttttcatcgatgctgctgagggggtaatgctgaacacagag
cggctgatcaagcacgcggtgcaggagaggctggcggtcactgtgtgcatcaacaagatt
gaccggctgatcctggagctgaagctgcctccgactgatgcttattacaagctgcgccac
attgtggatgaggtcaatggattaataagcatgtattccactgatgagaacctgatcctt
tccccactcctgggcaacgtctgcttctccagctcccagtacagcatctgcttcacgctg
ggctcctttgccaagatctacgccgacaccttcggtgacattaattaccaggaatttgct
aaaagactctggggtgacatctacttcaaccctaagacgcgaaagttcacaaaaaaggcc
ccaaccagcagctctcagaggagctttgtggagtttatcctggagccactttataagatc
cttgctcaggttgtgggtgatgtggacaccagcctcccgaggaccctggacgaacttggc
atccacctgaccaaggaggagctgaagttgaatatccgccccctgctcaggctggtctgc
aaaaagttctttggcgagttcacaggctttgtggacatgtgtgtgcagcatattccttct
ccaaaggtgggcgccaagcccaagattgagcacacctacactggtggagtagactctgac
ctgggcgaggccatgagtgactgtgaccctgatggtcccctgatgtgccacactactaag
atgtacagcacagatgatggagttcaatttcatgcctttggccgggtgctgagtggcacc
atccatgctgggcagcctgtgaaggtgctaggggagaactacaccctggaggatgaggaa
gactcccagatatgcactgtgggccgcctttggatctctgtggccaggtaccacattgag
gtgaaccgtgttcctgccggcaactgggttctgattgaaggtgttgatcaaccaattgtg
aagacagcgaccataactgaaccccgaggcaatgaggaggctcagattttccggcccttg
aagttcaatactacatctgttatcaagattgctgtggagccagtcaacccctcagagctg
cccaagatgcttgatggtctgcgcaaagtcaacaagagctatccatccctcaccaccaag
gtggaagagtctggtgagcatgtgatcctgggtaccggggagctctacctggactgtgtg
atgcacgatttgcggaagatgtactcggagatagacatcaaggtggctgacccagttgtc
acgttttgtgagacggtggtggaaacatcctctctcaagtgctttgctgaaacacccaat
aagaagaacaagatcaccatgattgctgagcctcttgagaagggcctcgccgaggacata
gagaacgaggtggtccagatcacgtggaacaggaagaagctgggagagttcttccagacc
aagtacgactgggatctgctggctgcccgttccatttgggcttttggcccagatgccact
ggccccaacatcctggtggatgatactctgccctctgaggtggataaggcccttcttggc
tcagtgaaagacagcatcgttcaaggtttccagtggggaaccagggaggggcccctctgt
gatgagttgattcggaacgtcaagtttaagatcctggatgcagtggttgcccaggagccc
ctgcaccggggtgggggccaaatcatccccacagccaggagagtcgtctactctgccttc
cttatggccactccccgtcttatggagccttactactttgtcgaggtccaggcccctgca
gattgtgtctctgcggtttacactgtcctggccaggcgcagggggcatgtgactcaggac
gcacccatcccaggctcccccctctacaccatcaaagctttcatcccagccatcgactct
tttggctttgagactgatctccggactcatacccagggacaagccttttccttgtctgtc
ttccaccattggcagattgtacctggtgatcctctggacaagagcattgtcattcgtccc
ttggagccacagcccgctcctcacctggcccgggaattcatgatcaaaacccgtcgtagg
aagggcctcagtgaagacgtgagcatcagcaagttcttcgacgatcctatgttgctggag
ctcgccaaacaggacgttgtgctcaattaccccatgtga
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