Lemur catta (Ring-tailed lemur): 123621930 Help Entry 123621930         CDS       T08326                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism lcat  Lemur catta (Ring-tailed lemur) Pathway lcat04015   Rap1 signaling pathway lcat04115   p53 signaling pathway lcat04145   Phagosome lcat04148   Efferocytosis lcat04151   PI3K-Akt signaling pathway lcat04350   TGF-beta signaling pathway lcat04510   Focal adhesion lcat04512   ECM-receptor interaction lcat04820   Cytoskeleton in muscle cells lcat05144   Malaria lcat05165   Human papillomavirus infection lcat05205   Proteoglycans in cancer lcat05206   MicroRNAs in cancer lcat05219   Bladder cancer Brite KEGG Orthology (KO) [BR:lcat00001]  09130 Environmental Information Processing   09132 Signal transduction    04015 Rap1 signaling pathway     123621930 (THBS1)    04350 TGF-beta signaling pathway     123621930 (THBS1)    04151 PI3K-Akt signaling pathway     123621930 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     123621930 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     123621930 (THBS1)    04148 Efferocytosis     123621930 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     123621930 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     123621930 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     123621930 (THBS1)  09160 Human Diseases   09161 Cancer: overview    05206 MicroRNAs in cancer     123621930 (THBS1)    05205 Proteoglycans in cancer     123621930 (THBS1)   09162 Cancer: specific types    05219 Bladder cancer     123621930 (THBS1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     123621930 (THBS1)   09174 Infectious disease: parasitic    05144 Malaria     123621930 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:lcat04131]     123621930 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:lcat00536]     123621930 (THBS1) Membrane trafficking [BR:lcat04131]  Endocytosis   Phagocytosis    Opsonins     123621930 (THBS1) Glycosaminoglycan binding proteins [BR:lcat00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    123621930 (THBS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 cEGF EGF_CA TSP1_ADAMTS Laminin_G_3 Laminin_G_2 TSP1_CCN EGF Laminin_G_1 Motif Other DBs NCBI-GeneID:  123621930 NCBI-ProteinID:  XP_045383969 LinkDB All DBs Position 1:74434834..74451761 Genome browser AA seq 1170 aa AA seqDB search MGLAWGLGVLFLLHVCGTNRIPESGGDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFR IEDANLIPPVPDDKFQDLVDAVRAEKGFLLLASLRQMKKTRGTLLALERKDHSGQVFSIV SNGKAGTLDLSLTVQGKQHVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAELD VPIQSIFTRDLANIARLRIAKGGVNDNFQGVLQNVRFVFGTTPEDILRNKGCSSSTNVLL TLDNNVVNGSSPAIRTNYIGHKTKDLQAICGISCDELSSMVLELRGLRTIVTTLQDSIRK VTEENKELANELRRPPLCYHNGVQYRNNEEWTVDSCTECRCQNSVTICKKVSCPIMPCSN ATVPDGECCPRCWPSDSADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCEGSSVQT RTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEARE TKACKKDACPINGGWGPWSPWDICSVTCGGGVQKRSRLCNNPTPQFGGKDCIGDVTENQI CNKQDCPIDGCLSNPCFAGAKCTSYPDGSWKCGACPPGYSGNGIQCKDVDECKEVPDACF NHNGEHRCENTDPGYNCLPCPPRFTGSQPFGRGVEHATANKQVCKPRNPCTDGTHDCNKN AKCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCKKDNCPN LPNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPYN HNPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPLEH NPDQLDSDSDLIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDN DGIPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDQDSVPDIDDICPENVDISETDFRRF QMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFFINTERDD DYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNAL WHTGNTPGQVRTLWHDPRHIGWKDFTAYRWHLSHRPKTGFIRVVMYEGKKIMADSGPIYD KTYAGGRLGLFVFSQEMVFFSDLKYECRDS NT seq 3513 nt NT seq  +upstreamnt  +downstreamnt atggggctggcctggggacttggtgtcctgttcctgttgcatgtgtgtggcaccaaccgc attccagaatccggaggagacaacagcgtctttgacatctttgaactcactggggctgcc cgcaagggctctgggcgccgactggttaagggccccgacccttccagcccagctttccga atcgaggatgccaacctgatcccccctgtgcctgatgacaagttccaagacctggtggat gccgtgcgggcagagaaagggttcctccttctggcctccctgaggcagatgaagaagacc cggggcaccctgctggccctggagcgcaaagaccattctggccaggtcttcagcatcgtc tccaacggcaaggcgggcaccctggacctcagcctgactgtgcaggggaagcagcacgtg gtctcggtggaagaagctctcctggcgaccggccagtggaagagcatcaccctgttcgtg caggaagacagggcccagctgtacatcgactgcgagaagatggagaacgccgagctggac gtccccatccaaagcatcttcaccagagacctggccaacatcgccagactccgcatcgca aagggaggcgtcaatgacaatttccagggggtgctgcagaatgtgaggtttgtctttggc accacaccagaagacatcctccggaacaaaggctgctccagctctaccaacgtcctcctc accctcgacaacaacgtggtgaatggttccagccctgccatccgcactaactacattggc cacaagacaaaggacctgcaagccatctgcggcatctcctgtgacgagctgtccagcatg gtgctggaactcaggggcctgcgcaccattgtgaccacgctgcaggacagcatccgcaaa gtgaccgaagagaacaaagaattggccaacgagctgaggaggcctcccctctgctatcac aacggagttcagtacaggaataacgaggaatggaccgtcgacagctgcacggagtgtcgc tgtcagaactcagttaccatctgcaaaaaggtgtcctgccctattatgccctgctccaat gccacggttcctgatggagaatgctgcccacggtgttggcccagcgactctgcggacgac ggctggtccccgtggtctgagtggacctcctgctctgtgacctgtggcaatggcattcag cagcgcggccgctcctgcgatagcctcaacaaccgatgcgagggctcctccgtccagacg cggacctgccacattcaggagtgtgacaagagatttaaacaggatggcggctggagccac tggtccccatggtcctcttgttctgtaacatgtggtgatggtgtgatcacaaggatccgg ctctgcaactctcccagcccccagatgaacgggaagccatgtgagggtgaagctcgggag accaaagcctgcaagaaagacgcctgccccatcaatggaggctggggtccctggtcacca tgggacatctgttctgtcacctgtggaggaggggtacagaaacgtagccggctctgcaac aaccccacaccccagtttggaggcaaggactgcatcggtgatgtcacagaaaaccagatc tgcaacaagcaggactgtccaattgatggatgcctgtccaatccttgctttgccggagcc aagtgcactagctaccctgacggcagctggaaatgtggcgcctgcccccctggttacagc ggaaatggcatccagtgcaaagatgttgacgagtgcaaagaagtgcctgatgcctgcttc aaccacaacggggaacacaggtgtgagaacacagaccccggctacaactgcctgccctgc ccaccacgcttcaccggctcgcagcccttcggccggggcgttgaacatgccacagccaac aaacaggtgtgcaagccccgaaacccctgcacggatgggacccacgactgcaacaagaat gccaagtgcaactatctgggccactacagcgaccccatgtaccgctgcgagtgcaagcct ggctatgcgggcaatggcatcatctgtggggaggacacggacctcgacggctggcccaac gagaacctggtgtgcgtggccaatgcaacttaccactgcaagaaggataattgccccaac cttcccaactcagggcaggaagactatgacaaggatggaattggcgatgcctgtgatgat gatgatgacaatgataaaattccagatgatagggacaactgtccgttccattacaaccca gcccagtatgactatgacagggatgatgtgggagaccgctgtgacaactgcccctacaac cacaaccccgatcaggcagacacagacaacaacggggaaggagacgcctgtgccgcagat attgacggggacggtatcctgaatgaacgagacaactgccagtatgtctacaatgtggac cagagggacaccgatatggatggggttggagatcagtgtgacaactgtcccttggaacac aatccagaccagctggactccgactcggacctcattggtgacacctgtgacaacaatcag gatattgatgaagacggccaccagaacaatctggacaactgtccctacgtgcccaatgcc aaccaggctgaccatgataaagatggcaagggagatgcctgtgaccatgacgatgacaac gacggcattcccgatgacagggacaactgcagactcgtgcccaatcccgaccagaaggac tctgatggtgatggtcgaggtgatgcttgcaaagatgattttgaccaggacagtgtgcca gacatcgatgacatctgtcctgagaatgttgatatcagtgagactgatttccgccgattc cagatgattcctctagatcccaaagggacatcccaaaatgaccctaactgggttgtacgc catcagggtaaagaactcgtccagactgtcaactgtgatcctggacttgctgtaggttat gacgagtttaatgctgtggacttcagtggcaccttcttcatcaacaccgaaagggacgat gactatgctggatttgtctttggctaccagtccagcagccgcttctatgttgtcatgtgg aaacaagtcacccagtcctactgggacaccaaccccaccagggctcagggatactcaggc ctttctgtgaaagtcgtgaactccaccacggggcctggggagcacctgcggaatgccctg tggcacaccggaaacacccctggccaggtgcgcaccctgtggcatgaccctcgtcacata ggctggaaagatttcaccgcctacagatggcatctcagccacaggccaaagacaggtttc attagagtggtgatgtatgaagggaagaaaatcatggctgactcagggcccatctatgac aaaacctatgctggcggtaggctaggattgtttgtcttctctcaagaaatggtgttcttc tccgacctgaaatatgaatgtagagattcctaa

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