KEGG   Lemur catta (Ring-tailed lemur): 123626074
Entry
123626074         CDS       T08326                                 
Symbol
KDM2B
Name
(RefSeq) lysine-specific demethylase 2B
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
lcat  Lemur catta (Ring-tailed lemur)
Pathway
lcat03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:lcat00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    123626074 (KDM2B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lcat03000]
    123626074 (KDM2B)
   04121 Ubiquitin system [BR:lcat04121]
    123626074 (KDM2B)
   03036 Chromosome and associated proteins [BR:lcat03036]
    123626074 (KDM2B)
Enzymes [BR:lcat01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     123626074 (KDM2B)
Transcription factors [BR:lcat03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    123626074 (KDM2B)
Ubiquitin system [BR:lcat04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     123626074 (KDM2B)
Chromosome and associated proteins [BR:lcat03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    123626074 (KDM2B)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     123626074 (KDM2B)
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JHD F-box Cupin_8 JmjC LRR_4 AppA_SCHIC
Other DBs
NCBI-GeneID: 123626074
NCBI-ProteinID: XP_045390833
LinkDB
Position
21:complement(26625406..26738530)
AA seq 1307 aa
MEAEKDSGRRLRPIDRQGYDENEDLSDVEEIVSVRGFSLEEKLRSQLYQGDFVHAMEGKD
FNYEYVQREALRVPLIFREKDGLGIKMPDPDFTVRDVKLLVGSRRLVDVMDVNTQKGTEM
SMSQFVRYYETPEAQRDKLYNVISLEFSHTKLEHLVKRPTVVDLVDWVDNMWPQHLKEKQ
TEATNAIAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLHNL
ALYEEWVLSGKQSDIFLGDRVERCQRIELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILH
SFNVPMQLRIYEIEDRTRVQPKFRYPFYYEMCWYVLERYVYCVTQRSYLTQEYQRESMLI
DAPRKPSVDGFSSDSWLEMEEESCEQQPQEEEEEQEEEEGEGADKAPKPPADGPVSPTST
PSEDQEAPGKKPKAPAMRFLKRTLSDESEESVKSTTMPIDYPKTPTGSPATEVAAKWTHL
TEFELKGLKALVEKLESLPENKKCVPEGIEDPQALLEGVKNVLKEHADDDPSLAITGVPV
VTWPKKTPKNRAVGRPKGKLGPASAVKLAANRTTAGARRRRTRCRKCEACLRTECGECHF
CKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEEGKFNLMLMECS
ICNEIIHPGCLKIKESEGVVNDELPNCWECPKCNHAGKTGKQKRGPGFKYASNLPGSLLK
EQKMNRDIKDGQEPAKRRGECEEAPRRRSDEHPKKVPPDGILRRRSDDVHLRRKRKYEKP
QELSGRKRASTLQTSPGSSSHLSPRPPLGSSLSPWWRSSLTHFQQQLKPGKEDKLFRKKR
RSWKNAEDRMALANKPLRRFKQEPEDDLPEAPPKARESDHSRSSSPTAGPSTEGAEGPEE
KKKVKMRRKRRLPNKELSKELSKELNHEIQKTESSLANENHQPIKSEPESENEEPKRPLG
LCERPHRFSKGLNGTPRELRHQLGPGVRSPPRVISRPPPSVSPPRCIQMERHVIRPPPIS
PPPDSLPLDDGAAHVMHREVWMAVFSYLSHQDLCVCMRVCRTWNRWCCDKRLWTRIDLNH
CKSITPLMLSGIIRRQPVSLDLSWTNISKKQLSWLINRLPGLRDLVLSGCSWIAVSALCS
SSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQMDNRSKLRNIVELRLAGLDITDAS
LRLIIRHMPLLSKLYLSYCNHVTDQSINLLTAVGTTTRDSLTEINLSDCNKVTDQCLSFF
KRCGNICHIDLRYCKQVTKAGCEQFIAEMSVSVQFGQVEEKLLQKLS
NT seq 3924 nt   +upstreamnt  +downstreamnt
atggaggcagagaaagactctggaagaagattgcgccccattgaccgccagggatacgac
gagaacgaggacctgtcggacgtggaggagatcgtcagcgtccgcggcttcagcctggag
gagaagctgcgcagccagctgtaccagggggacttcgtgcacgccatggagggcaaagat
ttcaactatgagtacgtacagagagaagctcttagagttcccctgatatttcgagaaaag
gatggactgggaattaagatgcctgaccctgacttcacagtccgagatgtcaaactccta
gtggggagccggcggttggtggacgtgatggatgtgaacacccagaagggcacggagatg
agcatgtcccagttcgtgcgttactacgagacgcccgaggctcagcgggacaagctgtac
aacgtcatcagcctcgagttcagccacaccaagctggagcacttagtcaagcgtccgact
gtggtagacctggtggactgggtggacaacatgtggccccagcatctgaaggaaaagcag
acagaagccacgaatgccatcgcagagatgaagtacccgaaagtgaagaagtactgtctg
atgagtgtgaaaggttgtttcactgacttccacatcgacttcggaggcacttccgtttgg
taccatgttttccggggtgggaagatcttctggctgattcctccgaccctgcacaatttg
gcgctgtatgaggagtgggtgttgtcaggcaaacagagtgacatctttctgggagaccgc
gtggaacgatgccaaagaattgagctgaaacagggctacacatttttcatcccttccggt
tggatccatgcagtctacacccctgtagactctctggtgttcggcggaaacatcctgcac
agcttcaacgtgcccatgcagctgcgcatctacgagatcgaggacagaacgcgggtgcag
cccaaattccgttaccctttctactatgagatgtgctggtatgtcttggagagatacgtg
tactgtgtgacccagcgctcctacctcactcaggagtaccagagagaatccatgcttatt
gatgccccgagaaagcccagcgtagacggcttctcatccgattcctggctggagatggag
gaggagtcctgtgagcagcagccccaggaggaagaggaggagcaggaggaggaagaaggg
gagggtgcagacaaggcaccgaagccgcccgccgatggccccgtctcgcccaccagcacc
ccctctgaggaccaggaggcccccgggaagaagcccaaagcacctgccatgaggttcctc
aaaaggactttgtctgatgagtcggaggaaagcgtgaagtccaccacgatgcccatagac
taccccaagacacccactggctctcccgccacagaggtcgctgccaaatggacccacctc
actgagtttgaactgaagggcctgaaagctctggtggagaaacttgaatccctcccagag
aacaagaagtgtgtccctgagggcatcgaggacccccaggcactcctggagggcgtgaag
aacgtcctgaaggagcacgcggatgatgaccccagtctggccatcactggggtccccgtg
gtcacttggccaaagaagactccaaagaaccgggctgtgggtcggcccaaggggaagctg
ggcccggcctccgcggtgaagttggccgccaaccggacaacggcaggagctcgccggcgc
cggacgcgatgccgcaagtgcgaggcctgcctgcggaccgagtgcggagagtgccacttc
tgcaaggacatgaagaaattcgggggccccgggcggatgaagcaaagctgcatcatgcgg
cagtgcatcgcgccagtgctgccccacaccgctgtgtgcctcgtgtgtggcgaggcgggg
aaggaagacacagtggaagaggaagaaggcaagtttaacctcatgctcatggagtgctcc
atctgcaatgaaatcatccaccctggatgccttaagattaaggagtcagagggtgtggtc
aacgacgagcttccaaactgctgggagtgtccgaagtgtaaccacgccggcaagaccggg
aaacaaaagcgtggccctggctttaagtacgcctccaatctgcccggctccctgctcaag
gagcagaagatgaaccgggacatcaaggacggccaggagcctgccaagcggaggggcgag
tgtgaggaggctcccaggcgcaggtcggacgagcaccccaagaaggtgcccccggatggc
atcctgcgcagaaggtctgacgacgtgcacctgaggaggaagcggaaatatgagaagccc
caagagctgagtggccgcaagcgagcctcgacgcttcaaacgtcccccggttcctcctct
cacctctcgccgaggccccctctaggcagcagcctcagcccttggtggagatccagtctc
actcacttccagcagcagctaaaacctggcaaagaagataagcttttcaggaaaaagcgg
cgctcctggaagaacgcggaggaccgcatggcactggccaacaagccgctccggcgcttc
aagcaggagccagaggacgatctgcccgaggcgccccccaaggccagggagagcgaccac
tcgcgctccagctcacccacggccgggcccagcactgagggggccgaggggccggaggag
aagaagaaggtgaagatgcgccggaagcggcggcttcccaacaaggagctgagcaaggag
ctgagcaaggagctcaaccacgagatccagaagacggagagcagcctggccaacgagaac
caccagcccatcaagtcggagcctgagagcgagaacgaggagcccaagcggcccctgggc
ctctgcgagcgcccccaccgcttcagcaaggggctcaacggcaccccccgggagctgcgg
caccagctggggcctggcgtgcgcagcccgccccgggtcatctcccggcccccaccctcc
gtgtccccacccaggtgcatccagatggagcgccatgtgatccggccaccccccatcagc
cccccgcccgactcgctgcccctggacgatggggccgcgcatgtcatgcacagggaggtg
tggatggccgtcttcagctacctcagccaccaagacctgtgtgtctgcatgcgggtctgc
aggacctggaaccgctggtgctgcgataagcggttgtggacccgcattgacttgaaccac
tgcaagtccatcacgcctctgatgctgagtggcatcatccggcggcagcccgtctccctc
gacctcagctggaccaacatctccaagaagcagctgagctggctcatcaaccgcttgcct
gggctccgagacttggtgctgtcgggctgctcatggattgcggtctcggctctctgtagc
tccagttgtcctttgctccggaccctggatgtccagtgggtagaaggactaaaggatgcc
cagatgcgggatctcctgtccccacccacggataacaggccaggtcagatggacaatcgg
agcaagctccggaacattgtagagctgcgcctggcaggcctggacatcacagacgcctcc
ctgcggctcatcatccgccacatgcccctgctgtccaagctctacctgagttactgtaac
cacgtcaccgaccagtccatcaacctgctcactgctgttggcaccaccacccgcgactcc
ttaactgagatcaacctgtcagactgcaataaggtcactgatcagtgcctgtccttcttt
aaacgctgtggaaacatctgtcatattgacctgaggtactgcaagcaagtcaccaaggca
ggctgtgagcagttcatagccgaaatgtctgtgagtgtccagtttgggcaagtggaagaa
aaactcctgcaaaaactgagttag

DBGET integrated database retrieval system