Lemur catta (Ring-tailed lemur): 123626074
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Entry
123626074 CDS
T08326
Symbol
KDM2B
Name
(RefSeq) lysine-specific demethylase 2B
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
123626074 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcat03000
]
123626074 (KDM2B)
04121 Ubiquitin system [BR:
lcat04121
]
123626074 (KDM2B)
03036 Chromosome and associated proteins [BR:
lcat03036
]
123626074 (KDM2B)
Enzymes [BR:
lcat01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
123626074 (KDM2B)
Transcription factors [BR:
lcat03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
123626074 (KDM2B)
Ubiquitin system [BR:
lcat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
123626074 (KDM2B)
Chromosome and associated proteins [BR:
lcat03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
123626074 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
123626074 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
Cupin_8
JmjC
LRR_4
AppA_SCHIC
Motif
Other DBs
NCBI-GeneID:
123626074
NCBI-ProteinID:
XP_045390833
LinkDB
All DBs
Position
21:complement(26625406..26738530)
Genome browser
AA seq
1307 aa
AA seq
DB search
MEAEKDSGRRLRPIDRQGYDENEDLSDVEEIVSVRGFSLEEKLRSQLYQGDFVHAMEGKD
FNYEYVQREALRVPLIFREKDGLGIKMPDPDFTVRDVKLLVGSRRLVDVMDVNTQKGTEM
SMSQFVRYYETPEAQRDKLYNVISLEFSHTKLEHLVKRPTVVDLVDWVDNMWPQHLKEKQ
TEATNAIAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLHNL
ALYEEWVLSGKQSDIFLGDRVERCQRIELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILH
SFNVPMQLRIYEIEDRTRVQPKFRYPFYYEMCWYVLERYVYCVTQRSYLTQEYQRESMLI
DAPRKPSVDGFSSDSWLEMEEESCEQQPQEEEEEQEEEEGEGADKAPKPPADGPVSPTST
PSEDQEAPGKKPKAPAMRFLKRTLSDESEESVKSTTMPIDYPKTPTGSPATEVAAKWTHL
TEFELKGLKALVEKLESLPENKKCVPEGIEDPQALLEGVKNVLKEHADDDPSLAITGVPV
VTWPKKTPKNRAVGRPKGKLGPASAVKLAANRTTAGARRRRTRCRKCEACLRTECGECHF
CKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEEGKFNLMLMECS
ICNEIIHPGCLKIKESEGVVNDELPNCWECPKCNHAGKTGKQKRGPGFKYASNLPGSLLK
EQKMNRDIKDGQEPAKRRGECEEAPRRRSDEHPKKVPPDGILRRRSDDVHLRRKRKYEKP
QELSGRKRASTLQTSPGSSSHLSPRPPLGSSLSPWWRSSLTHFQQQLKPGKEDKLFRKKR
RSWKNAEDRMALANKPLRRFKQEPEDDLPEAPPKARESDHSRSSSPTAGPSTEGAEGPEE
KKKVKMRRKRRLPNKELSKELSKELNHEIQKTESSLANENHQPIKSEPESENEEPKRPLG
LCERPHRFSKGLNGTPRELRHQLGPGVRSPPRVISRPPPSVSPPRCIQMERHVIRPPPIS
PPPDSLPLDDGAAHVMHREVWMAVFSYLSHQDLCVCMRVCRTWNRWCCDKRLWTRIDLNH
CKSITPLMLSGIIRRQPVSLDLSWTNISKKQLSWLINRLPGLRDLVLSGCSWIAVSALCS
SSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQMDNRSKLRNIVELRLAGLDITDAS
LRLIIRHMPLLSKLYLSYCNHVTDQSINLLTAVGTTTRDSLTEINLSDCNKVTDQCLSFF
KRCGNICHIDLRYCKQVTKAGCEQFIAEMSVSVQFGQVEEKLLQKLS
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagagaaagactctggaagaagattgcgccccattgaccgccagggatacgac
gagaacgaggacctgtcggacgtggaggagatcgtcagcgtccgcggcttcagcctggag
gagaagctgcgcagccagctgtaccagggggacttcgtgcacgccatggagggcaaagat
ttcaactatgagtacgtacagagagaagctcttagagttcccctgatatttcgagaaaag
gatggactgggaattaagatgcctgaccctgacttcacagtccgagatgtcaaactccta
gtggggagccggcggttggtggacgtgatggatgtgaacacccagaagggcacggagatg
agcatgtcccagttcgtgcgttactacgagacgcccgaggctcagcgggacaagctgtac
aacgtcatcagcctcgagttcagccacaccaagctggagcacttagtcaagcgtccgact
gtggtagacctggtggactgggtggacaacatgtggccccagcatctgaaggaaaagcag
acagaagccacgaatgccatcgcagagatgaagtacccgaaagtgaagaagtactgtctg
atgagtgtgaaaggttgtttcactgacttccacatcgacttcggaggcacttccgtttgg
taccatgttttccggggtgggaagatcttctggctgattcctccgaccctgcacaatttg
gcgctgtatgaggagtgggtgttgtcaggcaaacagagtgacatctttctgggagaccgc
gtggaacgatgccaaagaattgagctgaaacagggctacacatttttcatcccttccggt
tggatccatgcagtctacacccctgtagactctctggtgttcggcggaaacatcctgcac
agcttcaacgtgcccatgcagctgcgcatctacgagatcgaggacagaacgcgggtgcag
cccaaattccgttaccctttctactatgagatgtgctggtatgtcttggagagatacgtg
tactgtgtgacccagcgctcctacctcactcaggagtaccagagagaatccatgcttatt
gatgccccgagaaagcccagcgtagacggcttctcatccgattcctggctggagatggag
gaggagtcctgtgagcagcagccccaggaggaagaggaggagcaggaggaggaagaaggg
gagggtgcagacaaggcaccgaagccgcccgccgatggccccgtctcgcccaccagcacc
ccctctgaggaccaggaggcccccgggaagaagcccaaagcacctgccatgaggttcctc
aaaaggactttgtctgatgagtcggaggaaagcgtgaagtccaccacgatgcccatagac
taccccaagacacccactggctctcccgccacagaggtcgctgccaaatggacccacctc
actgagtttgaactgaagggcctgaaagctctggtggagaaacttgaatccctcccagag
aacaagaagtgtgtccctgagggcatcgaggacccccaggcactcctggagggcgtgaag
aacgtcctgaaggagcacgcggatgatgaccccagtctggccatcactggggtccccgtg
gtcacttggccaaagaagactccaaagaaccgggctgtgggtcggcccaaggggaagctg
ggcccggcctccgcggtgaagttggccgccaaccggacaacggcaggagctcgccggcgc
cggacgcgatgccgcaagtgcgaggcctgcctgcggaccgagtgcggagagtgccacttc
tgcaaggacatgaagaaattcgggggccccgggcggatgaagcaaagctgcatcatgcgg
cagtgcatcgcgccagtgctgccccacaccgctgtgtgcctcgtgtgtggcgaggcgggg
aaggaagacacagtggaagaggaagaaggcaagtttaacctcatgctcatggagtgctcc
atctgcaatgaaatcatccaccctggatgccttaagattaaggagtcagagggtgtggtc
aacgacgagcttccaaactgctgggagtgtccgaagtgtaaccacgccggcaagaccggg
aaacaaaagcgtggccctggctttaagtacgcctccaatctgcccggctccctgctcaag
gagcagaagatgaaccgggacatcaaggacggccaggagcctgccaagcggaggggcgag
tgtgaggaggctcccaggcgcaggtcggacgagcaccccaagaaggtgcccccggatggc
atcctgcgcagaaggtctgacgacgtgcacctgaggaggaagcggaaatatgagaagccc
caagagctgagtggccgcaagcgagcctcgacgcttcaaacgtcccccggttcctcctct
cacctctcgccgaggccccctctaggcagcagcctcagcccttggtggagatccagtctc
actcacttccagcagcagctaaaacctggcaaagaagataagcttttcaggaaaaagcgg
cgctcctggaagaacgcggaggaccgcatggcactggccaacaagccgctccggcgcttc
aagcaggagccagaggacgatctgcccgaggcgccccccaaggccagggagagcgaccac
tcgcgctccagctcacccacggccgggcccagcactgagggggccgaggggccggaggag
aagaagaaggtgaagatgcgccggaagcggcggcttcccaacaaggagctgagcaaggag
ctgagcaaggagctcaaccacgagatccagaagacggagagcagcctggccaacgagaac
caccagcccatcaagtcggagcctgagagcgagaacgaggagcccaagcggcccctgggc
ctctgcgagcgcccccaccgcttcagcaaggggctcaacggcaccccccgggagctgcgg
caccagctggggcctggcgtgcgcagcccgccccgggtcatctcccggcccccaccctcc
gtgtccccacccaggtgcatccagatggagcgccatgtgatccggccaccccccatcagc
cccccgcccgactcgctgcccctggacgatggggccgcgcatgtcatgcacagggaggtg
tggatggccgtcttcagctacctcagccaccaagacctgtgtgtctgcatgcgggtctgc
aggacctggaaccgctggtgctgcgataagcggttgtggacccgcattgacttgaaccac
tgcaagtccatcacgcctctgatgctgagtggcatcatccggcggcagcccgtctccctc
gacctcagctggaccaacatctccaagaagcagctgagctggctcatcaaccgcttgcct
gggctccgagacttggtgctgtcgggctgctcatggattgcggtctcggctctctgtagc
tccagttgtcctttgctccggaccctggatgtccagtgggtagaaggactaaaggatgcc
cagatgcgggatctcctgtccccacccacggataacaggccaggtcagatggacaatcgg
agcaagctccggaacattgtagagctgcgcctggcaggcctggacatcacagacgcctcc
ctgcggctcatcatccgccacatgcccctgctgtccaagctctacctgagttactgtaac
cacgtcaccgaccagtccatcaacctgctcactgctgttggcaccaccacccgcgactcc
ttaactgagatcaacctgtcagactgcaataaggtcactgatcagtgcctgtccttcttt
aaacgctgtggaaacatctgtcatattgacctgaggtactgcaagcaagtcaccaaggca
ggctgtgagcagttcatagccgaaatgtctgtgagtgtccagtttgggcaagtggaagaa
aaactcctgcaaaaactgagttag
DBGET
integrated database retrieval system