KEGG   Lemur catta (Ring-tailed lemur): 123631804
Entry
123631804         CDS       T08326                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DO beta chain isoform X1
  KO
K06752  MHC class II antigen
Organism
lcat  Lemur catta (Ring-tailed lemur)
Pathway
lcat04145  Phagosome
lcat04514  Cell adhesion molecules
lcat04612  Antigen processing and presentation
lcat04640  Hematopoietic cell lineage
lcat04658  Th1 and Th2 cell differentiation
lcat04659  Th17 cell differentiation
lcat04672  Intestinal immune network for IgA production
lcat04940  Type I diabetes mellitus
lcat05140  Leishmaniasis
lcat05145  Toxoplasmosis
lcat05150  Staphylococcus aureus infection
lcat05152  Tuberculosis
lcat05164  Influenza A
lcat05166  Human T-cell leukemia virus 1 infection
lcat05168  Herpes simplex virus 1 infection
lcat05169  Epstein-Barr virus infection
lcat05310  Asthma
lcat05320  Autoimmune thyroid disease
lcat05321  Inflammatory bowel disease
lcat05322  Systemic lupus erythematosus
lcat05323  Rheumatoid arthritis
lcat05330  Allograft rejection
lcat05332  Graft-versus-host disease
lcat05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:lcat00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    123631804
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    123631804
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    123631804
   04612 Antigen processing and presentation
    123631804
   04658 Th1 and Th2 cell differentiation
    123631804
   04659 Th17 cell differentiation
    123631804
   04672 Intestinal immune network for IgA production
    123631804
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    123631804
   05164 Influenza A
    123631804
   05168 Herpes simplex virus 1 infection
    123631804
   05169 Epstein-Barr virus infection
    123631804
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    123631804
   05152 Tuberculosis
    123631804
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    123631804
   05140 Leishmaniasis
    123631804
  09163 Immune disease
   05310 Asthma
    123631804
   05322 Systemic lupus erythematosus
    123631804
   05323 Rheumatoid arthritis
    123631804
   05320 Autoimmune thyroid disease
    123631804
   05321 Inflammatory bowel disease
    123631804
   05330 Allograft rejection
    123631804
   05332 Graft-versus-host disease
    123631804
  09166 Cardiovascular disease
   05416 Viral myocarditis
    123631804
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    123631804
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcat04147]
    123631804
Exosome [BR:lcat04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   123631804
  Exosomal proteins of epithelial cells
   123631804
  Exosomal proteins of breast milk
   123631804
SSDB
Motif
Pfam: MHC_II_beta C1-set MHC_I
Other DBs
NCBI-GeneID: 123631804
NCBI-ProteinID: XP_045397747
LinkDB
Position
2:complement(42965140..42969297)
AA seq 273 aa
MGSGWLPWAVALLLNLRRLDSSLTQGTDSPEDFVIQAKADCYFTNGTEKVRFVVRFIYNL
EEYARFDSDAGVFVALTALGQPDAEQWNRRADILERSRASVDALCRRNYELGAPFTVGRT
VQPEVTVYPERTPFLHQHNLLLCSVTGFYPGDIKIRWFWNGQEERAGVVSTGLVRNGDWT
FQTTVMLEMTPELGDVYTCLVDHPSLRSPVSVEWRAQSDYPWRKMLSGVAAFLLGLIFFL
VGMLIRLRAQKGYVETRMSGDEASRAVLPPQPL
NT seq 822 nt   +upstreamnt  +downstreamnt
atgggttctgggtggctcccctgggcggtggctctgctcctgaatctgagaaggctggat
tcctccctgactcaaggcacagactccccggaagattttgtgattcaggcaaaggctgac
tgttacttcaccaatgggacggaaaaggtgcgctttgtggtcagattcatctataacttg
gaggagtatgcacgtttcgacagtgacgcgggggtgtttgtggccctgacggcgctgggg
cagcccgacgccgagcagtggaaccgccgggcggatatactggagaggagcagagcgtcc
gtggatgcgctctgcagacgcaactacgagctgggcgcacccttcacggtggggagaaca
gtgcaaccagaggtgacagtgtacccagagaggaccccgttcctgcaccagcacaatctg
ctgctctgctctgtgactggcttctacccaggggacatcaagatcaggtggttctggaat
gggcaggaggagagagctggggtcgtgtccactggccttgtcaggaatggagactggacc
tttcagactacggtgatgctggaaatgactcccgaacttggggatgtctatacctgcctt
gttgatcaccccagcctgcggagccctgtgtctgtggagtggagagctcagtctgattat
ccttggagaaagatgctaagtggagttgccgccttcctgcttgggctgatcttctttctg
gtggggatgctcatccgcctcagggctcagaaaggatatgtggagacccggatgtctggt
gatgaggcctcaagagctgttcttccccctcagccactctaa

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