Lemur catta (Ring-tailed lemur): 123633944
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Entry
123633944 CDS
T08326
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat00310
Lysine degradation
lcat01100
Metabolic pathways
lcat04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
123633944 (SETDB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
123633944 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcat03036
]
123633944 (SETDB1)
Enzymes [BR:
lcat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
123633944 (SETDB1)
Chromosome and associated proteins [BR:
lcat03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
123633944 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
123633944 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
MBD
SET
Pre-SET
Chromo_MORC2_6th
DUF4537
Chromo
Motif
Other DBs
NCBI-GeneID:
123633944
NCBI-ProteinID:
XP_045400946
LinkDB
All DBs
Position
3:25345104..25379539
Genome browser
AA seq
1334 aa
AA seq
DB search
MSFSTELKFCINCDYNYYKVILVFLFHAEDKSMSSLPGCIGLDAATAAVESEEIAELQQA
VVEELGISMEELRQFIDEELEKMDCVQQRKKQLAELETWVIQKESEVAHVDQLFDDASRA
VTNCESLVKDFYSKLGLQYRDSSSEDEASRPTEIIEIPDEDDDVLSIDSGDAGSRTPKDQ
KLREAMAALRKSAQDVQKFMDAVNKKSSSQDLHKGTLSQMSGELSKDGDLIVSMRILGKK
RTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKSLLSGNHIAYDYHPPADKLYVGSRVVAKY
KDGNQVWLYAGIVAETPNVKNKLRFLIFFDDGYASYVTQSELYPICRPLKKTWEDIEDIS
CRDFIEEYITAYPNRPMVLLKSGQLIKTEWEGTWWKSRVEEVDGSLVRILFLDDKRCEWI
YRGSTRLEPMFSMKTSSASALEKKQGGQLRTRPNMGAVRSKGPVVQYTQDLTSTGTQFKP
MEPAQPTAPSAPPAPPAPPAPPAPPLSPQAGDSESLESQLAQSRKQVAKKSTSFRPGSVG
SGHSSPTSPTLSENVPGGKSGINQTYRSPLGLTTSAPASLAPPAPPAPPVTPAFHGMLER
APAEPSYRAPMEKLFYLPHVCSYTCLSRIRPMRNEQYRGKNPLLVPLLYDFRRMTARRRV
NRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMFCLDPYVLVDRKFQPYKPFY
YILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINTGPEFLVGCDCKDGCRD
KSKCACHQLTIQATACTPGGQINPNSGYQYKRLEECLPTGVYECNKRCKCDPNMCTNRLV
QHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANL
DHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNSGTEDPEESNDDSSDDNFCKDEDFS
TSSVWRSYATRRQTRGQKENGLSETASKDSRPPDLGPPHVPVPPSIPIGGCNPPSSEETP
KNKVASWLSCNSVSEGGFADSDSRSSFKTSEGGEGRGGGSRMEAEKACTSGLGIKDEGDI
KQAKKEDPDDQNKMLVVTESTRNYGYNPSPVKPEGLRRPPSKTSMLQSQRLVASAQSNPD
DVLTLSSSTESEGESGTSRKPTAGQTSATAVDSDDIQTISSGSEGDDFEDKKNMSGPMKR
QVAVKSTRGFALKSTHGIAIKSTNMASVEKGESAPVRKNTRQFYDGEESCYIIDAKLEGN
LGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKEL
LCCCGAIECRGRLL
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgagttttagtacagaactgaaattctgtattaattgtgattataattactacaaagta
attttagtttttctgttccatgcagaggacaaaagtatgtcctcccttcctgggtgcatt
ggtttagatgcagcaacagctgcagtggaatctgaagagattgcagagctacagcaggca
gtggttgaggagttgggtatctctatggaggaactgcggcagttcattgatgaagaactg
gagaagatggactgtgtacagcagcgtaagaagcagctagcagagttggagacatgggta
attcagaaagaatctgaggtggctcatgttgaccaactctttgatgatgcatccagggca
gtgactaactgtgagtctttggtgaaggacttctactccaagctgggcctacagtaccgg
gacagtagctctgaggatgaagcttccaggcctacagaaataattgagattcctgatgaa
gatgatgatgtcctcagtattgattcaggtgatgctgggagcagaactccaaaagaccag
aagctccgtgaagctatggctgccttaagaaaatcagctcaagatgtccaaaagttcatg
gatgctgtcaacaagaagagcagttcccaggatctgcataaaggaaccttgagtcagatg
tctggagaactaagcaaagatggtgacctgatagtcagcatgcggattctgggcaagaaa
agaactaagacgtggcacaaaggcacccttattgccatccaaacagttgggccagggaag
aagtacaaggtgaaatttgacaacaaaggaaagagtctactgtcggggaaccatattgcc
tatgattaccaccctcctgctgacaagctgtatgtgggcagtcgggtggtggccaaatac
aaagatgggaatcaggtctggctctatgctggcattgtagctgagacaccaaacgtcaaa
aacaagctcaggtttctaattttttttgatgatggctatgcttcctatgtcacacagtct
gaactgtatcccatttgtcggccactgaaaaagacttgggaggacatagaagacatctcc
tgccgagacttcatagaagaatatatcactgcctaccccaaccgccccatggtgctgctc
aagagcggccagcttatcaagacagaatgggaaggcacatggtggaagtcccgagttgag
gaagtggatggcagcctagtcaggatcctcttcctggatgacaaaagatgtgaatggatc
tatcgaggatctacacgactggaaccaatgttcagcatgaaaacatcctcagcctctgca
ctggagaagaagcaagggggacagctcaggacacgtccaaatatgggtgctgtgaggagc
aaaggcccagttgtccaatacacacaggacctgaccagtaccggaacccagttcaagcca
atggagcccgcacagcctacagctccatctgctccacctgccccacctgccccacctgcc
ccacctgctccacctctatccccccaagcaggtgacagtgaaagcttggaaagccagctt
gcccagtcacggaagcaggtagccaaaaagagcacatcctttcgaccaggatcagtgggc
tctggtcactcctcccctacatctcctacacttagtgaaaatgtccctggtgggaaatct
gggatcaaccagacatacagatcacctttaggcttaacaacctctgccccagcatcctta
gcacctccagcacctccagcgcctccagtaaccccagccttccatggcatgctagagcgg
gccccagcagagccctcctaccgtgctcccatggagaagctattctacttacctcatgtc
tgcagctatacttgtctgtctcggatcagacctatgagaaatgagcagtaccggggcaag
aaccctctgctggtcccattactatatgatttccggcggatgacagcccggcgtcgagtt
aaccgcaagatgggctttcatgtcatctataagacaccctgtggcctctgccttcggaca
atgcaggagatcgaacgctacctttttgagactggttgtgactttctcttcctggagatg
ttctgtttggatccatatgttcttgtggaccggaagtttcagccctataagcctttttac
tatattttggacatcacctatgggaaggaagatgttcccctatcctgtgtcaatgagatt
gacacaacccccccaccccaggtggcctacagcaaggaacgtatcccgggcaagggtgtt
ttcattaacacaggccctgaatttctggttggctgtgactgcaaggatgggtgtcgggac
aaatccaagtgtgcctgccatcaactaactatccaggctacagcctgtaccccagggggc
caaatcaaccctaactctggctaccagtacaagagactagaagagtgtctacccactggg
gtatatgaatgtaataaacgctgcaaatgtgacccaaacatgtgcacaaatcggctggtg
caacatggactgcaggttcgattacaactcttcaagacacagaacaagggctggggtatc
cgctgcttggatgacattgccaaaggctcttttgtgtgtatttatgcaggcaaaatcctg
acagatgactttgcagacaaggagggtctggaaatgggtgatgagtactttgcaaatctg
gaccatatcgagagcgtggagaacttcaaggaaggatatgagagtgacgccccctgttcc
tctgacagcagtggtgtagatttgaaggaccaggaagatggcaatagcggtacagaggac
cccgaagagtccaatgacgatagctcagatgataacttctgtaaggatgaggacttcagc
accagctcagtgtggcggagctatgctacccggaggcagacacggggccagaaggagaat
ggactgtccgaaacagcttccaaagactcccgccctccagatctcgggcccccacatgtt
cctgttcctccctcaatccctataggtggctgcaatccaccttcctctgaagaaacaccc
aagaacaaggtggcctcatggttgagttgcaatagcgtcagtgaaggtggttttgctgac
tctgatagccgttcatccttcaagaccagtgaaggtggggagggtcgtggtgggggaagc
agaatggaggctgagaaggcctgcacctcaggattgggcatcaaggatgaaggagacatc
aaacaggccaaaaaagaggaccctgatgaccaaaacaagatgttagtagttactgaaagc
actcgaaattatggttataatccttctcccgtgaagcctgaaggacttcgccgcccacct
agtaagactagtatgcttcagagccagagacttgtggcctctgctcagtccaaccctgat
gatgtcctgacactgtccagcagcacagaaagtgagggggaaagtgggacaagccgaaag
cccactgctggtcagacttcagctacagcggttgacagtgatgatatccagaccatctcc
tctggctctgaaggggatgactttgaggacaagaagaatatgtctggtccaatgaagcgc
caagtggcagtaaaatcaacccgaggttttgctcttaaatcaacccatgggattgccatt
aaatcaaccaacatggcctccgtggagaagggggagagtgcacctgttcgtaagaacaca
cgccaattctacgatggtgaggagtcttgctacatcatcgatgccaagcttgaaggcaac
ctgggccgctacctcaatcatagttgcagccccaacctgtttgtccagaatgtcttcgtg
gatacccatgatcttcgcttcccctgggtggccttctttgccagcaagagaatccgagct
gggacagaacttacttgggactacaactacgaggtgggcagtgtggaaggcaaggaactg
ctttgctgttgtggagccatcgaatgcagagggcgtcttctttag
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integrated database retrieval system