KEGG   Lemur catta (Ring-tailed lemur): 123637738
Entry
123637738         CDS       T08326                                 
Symbol
RAPGEF6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X1
  KO
K08020  Rap guanine nucleotide exchange factor 6
Organism
lcat  Lemur catta (Ring-tailed lemur)
Pathway
lcat04015  Rap1 signaling pathway
lcat04530  Tight junction
Brite
KEGG Orthology (KO) [BR:lcat00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04015 Rap1 signaling pathway
    123637738 (RAPGEF6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    123637738 (RAPGEF6)
SSDB
Motif
Pfam: RasGEF PDZ RA cNMP_binding RasGEF_N PDZ_6 RA_2 PDZ_2 Tcp10_C
Other DBs
NCBI-GeneID: 123637738
NCBI-ProteinID: XP_045406672
LinkDB
Position
5:complement(258971..429231)
AA seq 1634 aa
MNSPVDPGARQALRKKPPERTPEDLNIIYSYLHGMEILSNLREHQLRLVSARARYERYSA
NQILFCAETIARCWYILLSGSVLVRDAMVLPPCSFGKQFGGKRGCDCLVLEPSEMIVVEN
SKDNEGSILQREIPARQSRRRFRKINYKGERQTITDDVDINSYLSLPADLTKMHLTDNPH
PQVTHVSSSQSGCSIASDSGSSSLSDIYQNVNVSSGAPIGNNVFLRVATESEVGDVDLTR
LPEGPVDSEDEEEEDEEIDRTDPLQGRDLVRECLEKEPADKTDDDIEQLLEFMHQLPAFA
NMTMSVRRELCSVMIFEVVEQAGAVILEDGQELDSWYVILNGTVEISHPDGKVENLFMGN
SFGITPTLDKQYMHGIVRTKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVHEH
RELDRSGTRKGHIVIKATPERLIMHLIEEHSIVDPTYIEDFLLTYRTFLESPLDVGIKLL
EWFRIDSLRDKVTRIVLLWVNNHFNDFEGDPAMTRFLEEFERNLEDTKMNGHLRLLNIAC
AAKAKWRQVVLQKASRESPLHFSLSGGSEKGFGIFVEGVEPGSKAADSGLKRGDQIMEVN
GQNFENITFVKALEILRNNTHLALTVKTNIFVFKELLGRTEQEKSGVPHIPKIAEKKSNR
HSIQDVPGDIEQTSQEKGNKKIKANTVSGGRNKIRRILDKTRFSILPPKLFSDGGLSQSQ
DDSIVGTRHCRHSLAILPVPGTLSSSSPDLLQPTTSMLDFSNPSGSFHIPDQVIRVFKAD
QQSCYIIISKDTTAKEVVCHAVHEFGLTGASDTYSLCEVSVTPEGVIKQRRLPDQFSKLA
DRIQLNGRYYLKNNMETETLCSDEDAQELVRESQLSVLQLSTTELATQLSMRDFDLFRNI
EPTEYIDDLFKLDSKTGNTHLKEFEDIVNQETFWVASEILTESNQLKRMKIIKHFVKIAL
HCRECKNFNSMFAIISGLNLAPVARLRGTWEKLPSKYEKHLQDLQDLFDPSRNMAKYRNI
LSSQSMQPPIIPLFPVVKKDMTFLHEGNDSKVDGLVNFEKLRMIAKEIRQVVRMTSANMD
PAMMFRQRKKRWRSLGSLSQGSTNSNMLDVQGGAHKKRARRSSLLNAKKLYEDAQMARKV
KQYLSSLDVETDEEKFQMMSLQWEPAYGTLTKNFGEKRSAKACEMSPVPVRSAGQTAKAH
LHQPHRVSQALQVPAVSLHPARKKGQARDPALSASLPQKVLGTTEEVSGKKHTEDTISVA
SSLHSSPPASPQGSPRKGYTLTPSAKSDNLSDSSHSEISSRSSIVSNCSVDSMAAALQDE
RGSSQALAAPEPGGASAGTEPPSGQGPHGPPGPGWTLSKPSLIRGLAVSSSVSSEEVSHE
HVLTEAADSGRGSWTSCSSSSHDNFQSLPNPKSWDFLNSYRHAHLDDPIAEVEPADGEPY
PCAKGCSRTCSQCKGSLETDRLRQSWASSSSLSDMYEPNYGTVKRRVLESTQAEPAEGLD
PKDATDPAYKTVTSSTEKGLIVYCVTSPKKDDRYREPPPTPPGYMGISLADLKEGPHLHP
KPPDYSVAVHRSKMMHSSLSRLPAASPSSSPAACVSSRIVTQPQRHHWPPSHPKLADVTD
ADSEADESEQVSAV
NT seq 4905 nt   +upstreamnt  +downstreamnt
atgaactcgcccgtggaccccggcgccaggcaggcgctgaggaagaagccgcccgagcgg
acccccgaggacttaaatattatttattcttatcttcatggaatggaaatattatcaaat
ctcagggaacatcagcttagattagtgtctgcaagagcacgctatgagagatacagtgcc
aatcagattcttttttgtgcagaaactattgccagatgttggtatatcctgctctctgga
tctgtgcttgtgagagacgccatggtcttgcctccttgcagttttggtaagcagtttgga
ggaaaaagaggatgtgattgtcttgtattagagccttcagaaatgattgtggtagagaat
tctaaagataatgaaggtagtattctacaaagagaaattcctgccagacagtctcgaaga
agatttcgaaaaattaactataaaggagagcgccaaacaattaccgatgatgtggacatt
aacagctatctttctcttccggctgatctcaccaagatgcacctcacagacaaccctcat
ccacaggtgactcacgtgtcttctagtcagtctggctgcagcattgccagtgactctggg
agcagcagtttgtctgacatctatcagaatgtaaatgtgagttcaggagcaccaattggt
aacaatgtttttctacgtgtggctacggagagtgaggtaggagatgtagatttaacacgt
ctgccagaaggacctgttgattctgaggatgaagaagaggaagatgaagaaattgatcga
acagatccattgcaggggcgagatcttgttcgagaatgtcttgaaaaggagcctgcagac
aaaactgatgacgacattgaacaacttctggagtttatgcaccagctccctgcttttgca
aacatgaccatgtctgtaaggagagaactctgctcagtgatgatttttgaagtggtagag
caggctggagctgttattcttgaagatgggcaagagctcgactcatggtatgtcatttta
aatggcactgtagaaatcagtcatccagatggaaaagttgaaaatctgtttatgggaaat
agttttggaattactcccactctggataagcaatacatgcatggaattgtcaggactaaa
gtagatgattgtcagtttgtctgcatagcccagcaggattattggagaattttaaatcat
gtggaaaaaaacacccacaaagttgaggaagagggagaaattgtcatggtgcatgagcac
cgtgaactagaccggagtggaaccaggaaaggacatattgtaatcaaggcaacacctgag
cgtctcatcatgcatttaatagaagaacattccattgtggacccaacttatatagaagat
ttcctattaacttataggacatttcttgaaagtcctttggatgttgggatcaaactattg
gagtggtttaggattgacagcttaagggataaggtgacacggattgtattattatgggta
aataatcattttaatgattttgaaggtgatcctgctatgactcgatttctagaagaattt
gaaagaaatctggaagatacaaaaatgaatggtcatctccggctgttgaatattgcctgt
gccgccaaggccaagtggagacaggttgtgcttcagaaggcttcccgggagtcccctctg
cacttcagtcttagcggagggagcgagaagggatttggtatttttgttgaaggagtggaa
cctggtagcaaagctgctgattcaggactgaaacgtggtgatcagataatggaagtaaat
ggacaaaactttgagaatattacatttgtgaaggcccttgaaattttgaggaataatact
catcttgcacttactgtcaagaccaatatttttgtattcaaagagttacttggtaggact
gaacaagagaaatctggtgttcctcatattcccaaaattgctgaaaaaaaaagtaatcgc
cattctatccaggatgtgccaggagatattgaacagacatcacaggagaaaggaaataag
aaaattaaagcaaatactgtttcaggtggaagaaacaaaatcaggagaattctggataaa
acacgatttagtatcttgcctccaaaactatttagtgatggaggcctaagccagtcacag
gacgacagcattgtgggaacgaggcactgcaggcacagtctggctatcctgccggttccc
gggacactctcctccagcagccctgatctcctgcagcccaccaccagcatgctggacttc
tccaacccttccggtagtttccatattcctgatcaagttataagagttttcaaagcagat
cagcaaagttgctacattatcatcagtaaagacactacagctaaagaagtagtttgtcac
gctgttcatgaattcggtttgactggtgcatccgacacgtattctctctgtgaagtttct
gtcactcctgaaggtgtcataaaacagagaagacttccggatcagttctccaaattagct
gatagaattcaactcaatggaaggtactacctaaaaaataacatggagacagaaaccttg
tgttcagatgaagatgctcaggagctagtcagggaaagccagctgtcagtgctgcagctc
agcaccacggagctggccacacagctgtccatgagggactttgatttgtttcgtaatatt
gaacctacggaatacatcgatgaccttttcaagttagattccaaaacaggaaatactcat
ttgaaagagtttgaagacatcgtaaaccaagagacattctgggttgcctcagagatttta
actgaatcaaatcagctcaaacgaatgaagattattaagcattttgttaaaattgcactt
cattgtcgagaatgtaagaacttcaattccatgtttgcaataataagtggattgaacctg
gcacctgtagcgcgactcagaggtacttgggaaaagttgccaagcaaatatgagaaacat
ctccaagatctgcaagacctttttgatccatctagaaacatggcaaagtatagaaatatt
cttagcagtcaaagcatgcagcctccaattattcctctcttccccgttgtcaagaaagat
atgacatttctacatgaaggaaatgactccaaagtagatgggttagtaaactttgagaag
ctaagaatgattgccaaggaaatacgccaagtcgttcggatgacttctgctaacatggac
ccagctatgatgttccgacagaggaagaagaggtggcggagtctggggtccttgagtcaa
ggcagcacaaattcaaacatgctggatgttcagggaggtgctcacaagaaaagggcacgc
cgcagctctctgctcaatgccaagaagctgtatgaagatgcccagatggcaaggaaagtg
aagcagtatctttccagtctggatgtggagacagacgaagagaagttccagatgatgtcc
ctgcagtgggagcctgcatatggtaccctgaccaagaatttcggtgagaaaaggtccgcc
aaagcatgcgaaatgtctcccgtgccggtgaggtccgccgggcaaacagcgaaagcccac
ttgcatcagccccaccgagtgagccaggcgcttcaagtgccagctgtcagcttgcacccc
gccaggaagaagggacaagccagagaccctgcactgagtgcaagtttacctcagaaagtt
ttaggaacaactgaagaagtaagtggtaagaaacatacagaagacactatctctgtggca
tcatccttacattctagtcctcctgcatcacctcagggttcccctcggaaaggttatacg
cttacaccatcagctaagtctgacaacttgtctgactccagccacagcgagatttcttca
cggtccagcatcgtgagcaactgctccgtggactccatggccgcggccctgcaggacgag
cgcggctcctcccaggccctggccgcaccggagcccggcggggcgtcggcggggacggag
cccccctcggggcagggaccccacggtccgccgggccccggatggacactctcaaagcca
tctctaatcaggggcttggctgtctcatcttctgtgagcagtgaagaggtttcccacgag
catgtccttacagaagcagctgacagcggccgtggaagctggacttcctgttccagcagc
tcccacgacaacttccaaagccttccaaatccaaaaagctgggattttttgaactcttac
agacatgcccatttggatgaccctattgctgaagttgaacccgctgacggtgagccctat
ccctgtgccaagggctgctctaggacttgcagtcagtgtaaaggaagcctagagactgat
cggctgagacagagctgggcctcgtccagttctctgtctgacatgtatgagccaaactat
gggacagtgaagcggagagtgctggagagcacccaggccgagcccgcggaaggcttggac
cccaaggatgccactgacccagcgtacaaaactgtcacttctagtacggaaaagggtttg
attgtgtactgtgtcacctcacccaagaaggacgataggtatagggagccgccgcccacc
cctccaggatacatggggatttctttagcggacctaaaagaaggaccccacctgcaccca
aagcctccagactatagtgtggccgtgcacaggtccaagatgatgcacagcagcctctcc
aggctgccagcagcctctcccagtagcagccctgcggcctgtgtgtcatcgaggatcgta
acccagcctcagaggcaccactggccgccgtcccatcctaaactagcagatgtgactgat
gcagatagcgaagcagatgaaagtgaacaagtttcagcagtctag

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