Lemur catta (Ring-tailed lemur): 123638598
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Entry
123638598 CDS
T08326
Symbol
TRPC3
Name
(RefSeq) short transient receptor potential channel 3
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04360
Axon guidance
lcat05017
Spinocerebellar ataxia
lcat05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
123638598 (TRPC3)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
123638598 (TRPC3)
05022 Pathways of neurodegeneration - multiple diseases
123638598 (TRPC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcat04040
]
123638598 (TRPC3)
Ion channels [BR:
lcat04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
123638598 (TRPC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
123638598
NCBI-ProteinID:
XP_045408286
LinkDB
All DBs
Position
5:97949119..98009995
Genome browser
AA seq
922 aa
AA seq
DB search
MSTKVRKCKEQARVTFPAPEEEEEDEGEDEGAEPQRRRRGWRGVNGGLEPRSAPWQRELH
DYCPPPFSPGPDLSMDGSPSLRRMTVMREKGRRQAVRGPAFMFNDRGTSLTAEEERFLDA
AEYGNIPVVRKMLEESKTLNVNCVDYMGQNALQLAVGNEHLEVTELLLKKENLARIGDAL
LLAISKGYVRIVEAILNHPGFAASKRLTLSPSEQELQDDDFYAYDEDGTRFSPDITPIIL
AAHCQKYEVVHMLLMKGARIERPHDYFCKCGDCTEKQRHDSFSHSRSRINAYKGLASPAY
LSLSSEDPVLTALELSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAI
LNGDLESAEPLEVHRHKASLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTI
AIKCLVVLVVALGLPFLAIGYWIAPCSRLGKILRSPFMKFVAHAASFIIFLGLLVFNASD
RFEGITTLPNITVIDYPKQIFRVKTTQFTWTEMLIMVWVLGMMWSECKELWLEGPREYIL
QLWNVLDFGMLSIFIAAFTARFLAFLQATKAQQYVDSYVQESDLSEVTLPPEIQYFTYAR
DKWLPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIM
VFLAFMIGMFILYSYYLGAKVNAAFTTVEESFKTLFWSIFGLSEVTSVVLKYDHKFIENI
GYVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTLPPP
FSLVPSPKSFVYFIMRIVNFPKCRRRRLQKDIEMGMGNSKSRLNLFTQSNSRVFESHSFN
SILNQPTRYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEDKSQAT
EELAILIHKLSEKLNPSMLRCE
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaaggtcaggaagtgcaaggagcaggcgagggtgaccttccctgcgccggag
gaggaggaggaggacgaaggcgaggacgagggcgcggagccgcagcgccgccgccggggg
tggaggggcgtcaacggggggctggagccgcgctcagcgccctggcagcgggagctgcac
gactactgcccgccgcccttctcccccgggcccgacctgtccatggacggaagcccatcc
ctgaggcgcatgacggtgatgcgggagaagggccggcgccaggccgtccggggcccggcc
ttcatgttcaacgaccggggcaccagcctcacggcggaggaggagcgcttcctggacgcc
gccgagtacggcaacatcccggtggtgcgcaagatgctggaggagtccaagacgctgaac
gtcaactgcgtggactacatgggccagaacgcgctgcagctggccgtgggcaacgagcac
ctggaggtgaccgagctgctgctcaagaaggagaacctggcgcgcattggcgacgccctg
ctgctcgccatcagcaagggctacgtgcgcatcgtggaggccatcctcaaccaccccggc
ttcgcggccagcaaacgcctgaccctgagccccagcgagcaggagctgcaggacgacgac
ttctacgcctacgacgaggacggcacgcgcttctcgcccgacatcacccccatcatcctg
gcggcgcactgccagaagtacgaagtggtgcacatgctgctgatgaagggcgccaggatc
gagcggccgcacgactatttctgcaagtgcggggactgcacggagaagcagaggcacgac
tccttcagccactcgcgctcgaggatcaacgcctacaaggggctggccagcccggcgtac
ctgtctttgtccagcgaggacccggtgctcacagccctggagctcagcaacgagctggcc
aagctggccaacatagagaaggagttcaagaatgactatcggaagctctccatgcaatgc
aaagactttgtagtgggtgtgctggatctctgccgagactcagaagaggtagaagccatc
ttgaatggagatctggaatcagcagagcctctagaggtgcacaggcataaagcttcattg
agtcgtgtcaaacttgccattaagtatgaagtcaaaaagtttgtggctcaccccaactgc
cagcagcagctcttgacaatctggtatgagaacctctcaggcttgcgggaacagaccata
gctatcaagtgtctagttgtgctggtcgtggccttgggccttccattcctcgccattggc
tactggattgcaccttgcagcaggctggggaaaattctgcgaagcccttttatgaagttt
gtggcacacgcggcttccttcatcatcttcctgggcctgcttgtgttcaatgcctcagac
aggtttgaaggcatcaccacgctgcccaatatcactgttattgattatcccaaacagatc
ttcagggtgaaaactacccagttcacatggacagaaatgctaattatggtctgggttctt
ggaatgatgtggtctgagtgtaaggagctgtggttggaaggaccaagggaatacattttg
cagttgtggaacgtgcttgacttcgggatgctctccatcttcattgctgctttcacagcc
agattcctagctttccttcaggcaacgaaagcacagcagtatgtggacagttatgttcag
gagagtgacctcagtgaagtcacactcccaccagagatacagtatttcacgtacgctaga
gataaatggctcccttctgaccctcagatcatatctgaaggcctttatgccatagctgtt
gtgctcagcttctctcggatcgcatacatcctccctgcaaatgagagctttggcccctta
cagatctctcttggaaggactgtaaaggacatattcaagttcatggtcctctttatcatg
gtgtttcttgcctttatgattggcatgttcatactttattcttactaccttggggctaaa
gtaaatgccgcttttaccactgtagaagaaagtttcaagactttattttggtcaatattt
gggttgtctgaagtgacttccgttgtgctcaaatatgatcacaaattcatagagaatatt
ggatacgttctttatggaatatacaatgtaactatggtggtcgttttactcaacatgcta
attgctatgattaatagctcatatcaagaaattgaggatgacagtgacgtggaatggaag
tttgctcgttcaaaactttggttatcctattttgatgatggcaaaacattacctccaccc
ttcagtctagttcctagtccaaaatcatttgtttatttcatcatgcgaatcgttaacttt
cccaaatgcagaaggagaaggcttcagaaggatatagaaatgggaatgggtaactcaaag
tccaggttaaacctcttcactcagtctaactcaagagtttttgaatcacacagttttaac
agcattctcaatcagccaacacgttatcagcagataatgaaaagacttataaagcggtat
gttttgaaagcacaagtagacaaagaaaatgacgaagttaatgaaggtgaattaaaagaa
atcaagcaagatatctccagccttcgttatgaacttttggaggacaagagccaagcaacc
gaggaattagccattcttattcataaacttagtgagaaactcaatcccagcatgctgaga
tgtgaatga
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