Lemur catta (Ring-tailed lemur): 123639404
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Entry
123639404 CDS
T08326
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat01524
Platinum drug resistance
lcat04115
p53 signaling pathway
lcat04210
Apoptosis
lcat04215
Apoptosis - multiple species
lcat05010
Alzheimer disease
lcat05012
Parkinson disease
lcat05014
Amyotrophic lateral sclerosis
lcat05016
Huntington disease
lcat05020
Prion disease
lcat05022
Pathways of neurodegeneration - multiple diseases
lcat05134
Legionellosis
lcat05152
Tuberculosis
lcat05160
Hepatitis C
lcat05161
Hepatitis B
lcat05162
Measles
lcat05164
Influenza A
lcat05168
Herpes simplex virus 1 infection
lcat05169
Epstein-Barr virus infection
lcat05200
Pathways in cancer
lcat05222
Small cell lung cancer
lcat05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
123639404 (APAF1)
04215 Apoptosis - multiple species
123639404 (APAF1)
04115 p53 signaling pathway
123639404 (APAF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
123639404 (APAF1)
09162 Cancer: specific types
05222 Small cell lung cancer
123639404 (APAF1)
09172 Infectious disease: viral
05161 Hepatitis B
123639404 (APAF1)
05160 Hepatitis C
123639404 (APAF1)
05164 Influenza A
123639404 (APAF1)
05162 Measles
123639404 (APAF1)
05168 Herpes simplex virus 1 infection
123639404 (APAF1)
05169 Epstein-Barr virus infection
123639404 (APAF1)
09171 Infectious disease: bacterial
05134 Legionellosis
123639404 (APAF1)
05152 Tuberculosis
123639404 (APAF1)
09164 Neurodegenerative disease
05010 Alzheimer disease
123639404 (APAF1)
05012 Parkinson disease
123639404 (APAF1)
05014 Amyotrophic lateral sclerosis
123639404 (APAF1)
05016 Huntington disease
123639404 (APAF1)
05020 Prion disease
123639404 (APAF1)
05022 Pathways of neurodegeneration - multiple diseases
123639404 (APAF1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
123639404 (APAF1)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
123639404 (APAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
NB-ARC
APAF1_C
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
APAF-1-like_WHD
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
CARD
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
RMC1_N
eIF2A
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
WD40_RFWD3
WD40_like
Ge1_WD40
PEP5_VPS11_N
Beta-prop_WDR11_2nd
Beta-prop_IFT122_2nd
CARD_2
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_DCAF12
Nbas_N
Utp8_b_propeller
Beta-prop_SPT8
AAA_16
Hira
AAA_22
NPHP3_N
ATPase_2
AAA_18
NACHT
Motif
Other DBs
NCBI-GeneID:
123639404
NCBI-ProteinID:
XP_045409127
LinkDB
All DBs
Position
6:complement(21024287..21115970)
Genome browser
AA seq
1248 aa
AA seq
DB search
MDAKSRNCLLQHKEALEKDIKTPYIMDHMVGDGVLTTLEEEEVRNEPTQQKRAALLIKMI
LKKDNYCYVSFYNALLLEGYKDLAAFLQDGIPVVSSSSDKDSVGGITTYVRTVLCEGGVP
QRPVVFVTRKKLVNAIQQKLFKLNGEPGWVTIYGMAGCGKSVLAAEAVRDHSLLEGCFPS
GVHWVSVGKQDKSGLLMKLQNLCARLDQDESFSQRLPLNIEEAKDRLRILMLRKYPRSLL
ILDDVWDPWVLKAFDNQCQILLTTRDKSVTDSVMGPKYVVPVESGLGKEKGLEILSLFVN
VKKADLPEQAHSIIKECKGSPLVVSLIGALLRDFPNRWDYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGKSFHYYLHDLQVDFLTEKNRSQLQDLHKKMITQFQRYHQLHTLSPDQEDC
MYWYNFLAYHMASANMHKELCALMFSLDWIKAKTELVGPAHLIHEFMEYRHILDKKDCAV
CENFQEFLSLNGHLLGRQPFPNIVQLGLCEPETSEVYQQAKLQAKQEVDNGMLYLEWINK
KNIKNLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEV
LCCAFSADDTFIATCSVDKKVKIWNSMTGELVRSYDEHSEQVNCCHFTSKSHHLLLATGS
SDFLLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANEKKS
INVKQFFLNSEDSQEDMEVIVKCCSWSADGARIMVAAKNKIFLFDIHTSGLLTEIHTGHH
STIQYCDFSPHNHLAVVALSQYCVELWNIDSCLKVADCRGHLSWVHGVMFSPDGSSFLTS
SDDQTIRLWETKKVCKNYDIVLKQEVDVVFQENGVMVLAVDNIRRLQLINGETGQIDYLT
EAQVSCCCLSPHHQYIAFGDEEGAIEILELLNNRIFQSRIRHKKAVRHIQFTADGKTLIS
SSDDSAIQVWNWQSEEYVFLQAHQETVKSFRLLKNSRLLSWSFDGTVKIWNISTGRMEKD
FICHQGTVLSCDISLDATKFSSTSADKTAKIWSFELLSPLHELRGHNGCVRCSAFSVDST
LLATGDDNGEVRIWNVSSGELLHLCAPITEEGATTHGGWVTDLCFSPDSKMLVSAGGYLK
WWNVITGECSQTFYTNGTNLKKIHVSTDFKTFVTVDNLGILYILQILE
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaaaatctcggaattgtttgcttcaacataaggaagctctggaaaaggacatc
aagacaccctacatcatggatcacatggttggtgatggagttttaacaacattggaggag
gaagaagtaagaaatgagcctactcaacagaaaagagcagctttactaattaaaatgata
cttaaaaaagataattattgctacgtatcattctataatgctctgctacttgaaggatat
aaagatcttgctgcctttctccaagatggcattcctgttgtctcttcttccagtgacaaa
gattcagttggtggaataactacatacgttaggacagttctgtgtgaaggtggagtacca
cagaggccagtcgtttttgttaccagaaagaagctggtgaatgcaattcagcagaagctc
ttcaaattgaatggtgaaccgggatgggtcaccatatatggaatggcaggctgtgggaag
tctgtattagcggcagaagctgttcgagatcattctctcttagaaggttgtttcccaagt
ggtgtgcattgggtttcagttgggaaacaagacaaatctgggcttctgatgaaactgcag
aatctttgcgcacggttggatcaagatgagagtttttcccagaggcttccacttaatatt
gaagaggctaaagatcgtctccgcattcttatgcttcgcaaatacccaaggtctctgttg
atcttggatgatgtttgggatccttgggtgttgaaagcttttgataatcagtgtcagatt
cttcttacaaccagagacaagagtgttacagattcagtaatgggtcccaaatatgtagtc
cctgtggagagtggcttaggaaaagaaaaaggacttgaaattttatccctttttgttaat
gtgaagaaagcagacttgccagaacaagctcatagtattataaaagaatgtaaaggttct
ccccttgtagtatctttaattggtgcacttttacgtgattttcccaatcgctgggattac
tacctcagacaacttcagaataagcaatttaagagaataaggaaatcttcatcttatgat
tatgaggctctggatgaagccatgtctataagtgtggaaatgctcagagaagacatcaaa
gattattacacagatctttccatccttcagaaggatgttaaggtgcctacaaaggtgtta
tgtattctctgggacatggaaactgaagaagttgaagacatactgcaggagtttgttaat
aagtctctcttattttgtgatcggaatggaaaatcatttcattattatttacatgatctt
caagtagattttcttacagagaagaatcgcagtcagcttcaggatctacataagaagatg
atcactcagtttcagaggtatcaccaactacatactctttcaccagatcaggaggattgc
atgtattggtacaactttctggcctatcacatggccagtgccaatatgcacaaagaactg
tgtgccttaatgttttccctggattggattaaagcaaaaacagaacttgtgggccctgct
catctgattcatgaatttatggaatacaggcatatactggataaaaaggattgtgcagtc
tgtgagaattttcaagagtttttatctttaaatggacaccttcttggacgacagccattt
cctaatattgtacaactgggtctctgtgaaccggaaacttcagaagtttatcagcaagct
aagctgcaggccaagcaggaggtcgacaatggaatgctttacctggaatggataaacaaa
aaaaacatcaagaatctctcccgcttagttgtccgcccccatacagatgctgtttaccat
gcctgcttttctcaggatggccagagaatagcttcttgtggagctgataaaaccttacag
gtgttcaaagctgaaacaggagagaaacttctagaaatcaaggctcatgaggatgaagtg
ctttgttgtgctttctctgcagatgacacgtttatagcaacctgctcagtggataaaaaa
gtgaagatttggaattctatgactggggaactagtacgtagctacgatgagcactcagag
caagtcaattgctgccatttcaccagcaagagtcatcatcttctcttagccacggggtca
agtgacttcctcctcaaactgtgggatttgaatcaaaaagaatgtcgaaataccatgttt
ggccatacaaattcagtcaatcactgcagattttcaccagatgataagcttttggctagt
tgttcagctgatggaacattaaagctttgggatgtaaaatcagcaaacgagaagaaaagc
attaatgtgaaacaattcttcctaaattcagaggactcccaagaggatatggaagtgata
gtgaaatgttgttcatggtctgctgatggtgctaggataatggtggccgcaaaaaataaa
atttttctttttgacattcataccagtggcctattgacagaaatccacacaggccatcac
agcaccatccagtactgtgacttctccccgcataaccatttggcagtagtggctttgtcc
caatactgtgtggagctatggaatatagattcatgtttaaaggtagcagattgcagagga
catttaagttgggttcatggtgtgatgttttctcctgatggatcatcatttttgacatct
tctgatgaccagacaatcaggctctgggagacaaagaaagtatgtaagaactatgatata
gtgttaaagcaagaagtagatgttgtgtttcaagaaaatggagtgatggtcctcgcagtt
gacaatataagacgtctacaactcattaatggagaaacaggtcagattgattatctgact
gaagctcaagttagttgctgttgcttaagtccacatcatcagtatattgcatttggagat
gaagaaggagccattgagattttagaacttctaaacaacagaatcttccagtccagaatt
cggcacaagaaagccgtaaggcatatccaattcacagctgatgggaagactcttatttca
agttctgatgattctgcaattcaggtgtggaattggcaatcagaggagtatgtctttctg
caagcccatcaggaaacagtgaaaagctttaggctcttgaaaaattcaagactgctttct
tggtcatttgatggaacagtgaagatatggaatatttctactggaagaatggaaaaagac
ttcatctgtcatcagggtacggtactttcttgtgatatttctcttgatgctaccaagttt
tcgtctacctctgctgacaagactgcaaagatttggagttttgaactgctttcccctctt
catgagttgaggggccacaacggctgtgtgcgctgctctgccttctctgtggacagtacc
ctgctggcgactggagatgacaatggagaagtcaggatatggaatgtctccagtggtgag
cttctccatttgtgtgctccgattacagaagaaggagctactacccacggaggctgggtg
actgacctttgtttttctccagacagcaaaatgcttgtctctgctggaggatatcttaag
tggtggaatgttatcaccggggaatgctcacagaccttctatacaaatggaaccaatctt
aagaaaatacatgtgtccactgacttcaaaacatttgtgactgttgataatcttggtatt
ttatatattttacagattttagagtaa
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integrated database retrieval system
