Lemur catta (Ring-tailed lemur): 123642600 Help Entry 123642600         CDS       T08326                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism lcat  Lemur catta (Ring-tailed lemur) Pathway lcat04010   MAPK signaling pathway lcat04064   NF-kappa B signaling pathway lcat04120   Ubiquitin mediated proteolysis lcat04140   Autophagy - animal lcat04144   Endocytosis lcat04380   Osteoclast differentiation lcat04620   Toll-like receptor signaling pathway lcat04621   NOD-like receptor signaling pathway lcat04622   RIG-I-like receptor signaling pathway lcat04657   IL-17 signaling pathway lcat04722   Neurotrophin signaling pathway lcat04936   Alcoholic liver disease lcat05132   Salmonella infection lcat05133   Pertussis lcat05135   Yersinia infection lcat05140   Leishmaniasis lcat05142   Chagas disease lcat05145   Toxoplasmosis lcat05152   Tuberculosis lcat05160   Hepatitis C lcat05161   Hepatitis B lcat05162   Measles lcat05168   Herpes simplex virus 1 infection lcat05169   Epstein-Barr virus infection lcat05170   Human immunodeficiency virus 1 infection lcat05171   Coronavirus disease - COVID-19 lcat05200   Pathways in cancer lcat05222   Small cell lung cancer lcat05235   PD-L1 expression and PD-1 checkpoint pathway in cancer lcat05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:lcat00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     123642600 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     123642600 (TRAF6)    04064 NF-kappa B signaling pathway     123642600 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     123642600 (TRAF6)    04140 Autophagy - animal     123642600 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     123642600 (TRAF6)    04621 NOD-like receptor signaling pathway     123642600 (TRAF6)    04622 RIG-I-like receptor signaling pathway     123642600 (TRAF6)    04657 IL-17 signaling pathway     123642600 (TRAF6)   09156 Nervous system    04722 Neurotrophin signaling pathway     123642600 (TRAF6)   09158 Development and regeneration    04380 Osteoclast differentiation     123642600 (TRAF6)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     123642600 (TRAF6)    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     123642600 (TRAF6)   09162 Cancer: specific types    05222 Small cell lung cancer     123642600 (TRAF6)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     123642600 (TRAF6)    05161 Hepatitis B     123642600 (TRAF6)    05160 Hepatitis C     123642600 (TRAF6)    05171 Coronavirus disease - COVID-19     123642600 (TRAF6)    05162 Measles     123642600 (TRAF6)    05168 Herpes simplex virus 1 infection     123642600 (TRAF6)    05169 Epstein-Barr virus infection     123642600 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     123642600 (TRAF6)    05135 Yersinia infection     123642600 (TRAF6)    05133 Pertussis     123642600 (TRAF6)    05152 Tuberculosis     123642600 (TRAF6)   09174 Infectious disease: parasitic    05145 Toxoplasmosis     123642600 (TRAF6)    05140 Leishmaniasis     123642600 (TRAF6)    05142 Chagas disease     123642600 (TRAF6)   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     123642600 (TRAF6)   09167 Endocrine and metabolic disease    04936 Alcoholic liver disease     123642600 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:lcat04131]     123642600 (TRAF6)    04121 Ubiquitin system [BR:lcat04121]     123642600 (TRAF6) Enzymes [BR:lcat01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      123642600 (TRAF6) Membrane trafficking [BR:lcat04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     123642600 (TRAF6) Ubiquitin system [BR:lcat04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     123642600 (TRAF6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 SlyX Sina_ZnF TRAF3_RING RING_XB3-XBAT31 U-box zf-RING_11 DUF3450 DUF4455 Spc29 DUF16 DUF7310 HAP1_N DUF1664 Med21 DUF7607 EzrA Myosin_tail_1 CENP-F_leu_zip AAA_13 UPF0242 ATG16 Motif Other DBs NCBI-GeneID:  123642600 NCBI-ProteinID:  XP_045413776 LinkDB All DBs Position 7:complement(86065156..86085545) Genome browser AA seq 533 aa AA seqDB search MSLLNCENSCASSQSESDCCAAMASSCGATAKDDSVSGTASTGTLSSSFMEEIQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD NFAKREILSLMVRCPNEGCLHKMELRHLEDHQAHCEFALMNCPQCQHPFQKCQINIHILK DCPRRQVSCANCAVLMAFEDKEIHDQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAPI PCTFSTFGCHEKMQRNHLARHLQENTQSHMRMLAQAVHSLSLALTPYDPASLSRVSSGCH PEVQNFQETIHQLEGRLVRQDHQIRELTAKMETQSMYVSELKRTIRSLEDKVAEIEAQQC NGIYIWKIGNFGMYLKSQEEERPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISL FVHTMQGEYDSHLPWPFQGTIRLTILDQSEAPIRQNHEEIMDAKPELLAFQRPTIPRNPK GFGYVTFMHLEALKQRTFIKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDTGL NT seq 1602 nt NT seq  +upstreamnt  +downstreamnt atgagtctgctaaactgtgaaaacagctgcgcatccagccagtccgaaagcgactgctgt gctgccatggccagctcctgtggcgccacagccaaagatgacagcgtgagtggaactgcc agcacggggaccctctccagctcctttatggaagagatccagggctatgatgtggagttt gacccacccctggaaagcaagtatgagtgccccatctgcttgatggcattacgggaagca gtgcaaacaccctgcggccacaggttctgcaaagcctgcatcataaaatcaataagggat gcaggtcacaaatgtccagttgacaatgaaatactgctggaaaatcaactatttcctgac aattttgcaaaacgagagattctttctctgatggtgaggtgtccaaatgaaggttgtttg cacaagatggaactgaggcatctcgaggatcatcaagcacattgtgagtttgctcttatg aattgtccccagtgccagcatcccttccaaaaatgccaaatcaatattcacattctcaag gattgtccaagaagacaggtttcttgtgcaaattgtgctgtattgatggcatttgaagat aaagagatccatgaccagaactgtcctttggcaaatgtcatctgtgaatactgcaatacc atgctcatcagagaacagatgcctaatcattatgacctagactgccctacagctccaatt ccatgcacattcagtacttttggttgccatgaaaagatgcagaggaatcacttggcacgc cacctacaggagaacacccagtcgcacatgagaatgttggcccaggctgttcatagttta agccttgccttaactccctatgatcctgcctctctgtcccgggtttcctctgggtgtcac ccagaagtccaaaatttccaggaaaccattcaccagttagaaggtcgccttgtaagacaa gatcatcaaattcgggagctgactgccaaaatggaaactcagagcatgtatgtaagtgag ctcaaacgaactattcggtcccttgaggacaaagttgctgaaattgaagcacagcagtgc aatgggatttacatctggaagattggcaactttgggatgtacttgaaatctcaagaagaa gagagaccggttgtcattcatagccctggattctacacaggcaaacctgggtacaaactc tgcatgcgtttgcaccttcaattaccaactgctcagcgctgtgcaaactatatatccctc tttgtccacacaatgcaaggagagtatgacagccacctcccttggcccttccagggtaca atacgccttacaattcttgatcagtctgaagcacctataaggcaaaaccatgaagagata atggatgccaaaccagagctgcttgccttccagcgacccacaatcccacggaacccaaaa ggttttggctatgtaacttttatgcatctggaagccctaaaacaaagaaccttcattaag gatgacacattattagtacgctgtgaggtctctacccgcttcgacatgggtagccttcgg agggagggttttcagccacgaagtaccgatacagggttatag

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