Lemur catta (Ring-tailed lemur): 123649179
Help
Entry
123649179 CDS
T08326
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
123649179 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcat03400
]
123649179 (LIG4)
Enzymes [BR:
lcat01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
123649179 (LIG4)
DNA repair and recombination proteins [BR:
lcat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
123649179 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
123649179
NCBI-ProteinID:
XP_045423096
LinkDB
All DBs
Position
13:14806069..14813521
Genome browser
AA seq
911 aa
AA seq
DB search
MAASQTSQTVASHVPFADLCSTLERIQKSKGRAEKIRPFREFLDSWRKFHDALHKNQKDV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTGTRG
DAGDFAMIAYFVLRPRCLKKGSLTIQQVNDLLDSVASNNSAKRKDLIKKSLLQLITQSSA
LEQKWLIRMIIKDLKLGVSQQTVLSVFHDDAVELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLAAIADIERIEKDMKHQSFYIETKLDGERMQMHKDGTEYKYFSRNGYNYTD
QFGASPDEGSLSPFIHNAFKTDIQVCILDGEMMAYNPNTQTFMQKGIKFDIKRMVEDSEL
QTCYCVFDVLMVNNKKLGHETLRKRYEILSSIFMPIPGRIEIVQKTQAHTKNEVIDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVSELMDELDILIVGGYWGKGSRGGMM
SHFLCAVAEKPPPGEKPSVFHTLSRVGSGYTMKELYDLGLKLAKHWKPFHKKAPPSSILF
GTEKPEVYIEPCNSVIVQIKAAEIVPSDMYKTGCTLRFPRIEKIRDDKEWHECMTLDDLE
QLRGKASGKLASKHFYVGVDDEPQEKKRKAAPKMKKVIGIIEHLKAPNLSNINKVSNIFE
DVEFCVMSGTASHPKTDLENRIAEFGGYIVQNPGPDTYCIIAGSENIRVRNIISSGEHDV
VKPAWLLECFKAKSCVPWQPRFMIHMCPSTKKHFAREYDCYGDSYFVDTDLNQLKEVFSG
IKNSNEQTPEEMSSVIADLEYRYSWDHSPFSMFRRHTIYLDLYTVINDLSTKTEGTRLAI
KALELQFHGAKVVSCLAEGVSHVIIGEDHSRVANFKAFRRNFKRKFKILKEDWVTDSIDK
CELQEENQYLI
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacaaacttcgcaaactgttgcatctcacgttccttttgcagatttatgt
tcaactttagaacgaatacagaaaagtaaaggacgtgcagaaaaaatcagacccttcagg
gaatttttggattcttggagaaaatttcatgatgcccttcataagaaccaaaaagatgtc
acagactctttttatccagcaatgagactaattcttcctcagctagaaagagagagaatg
gcctatggaatcaaagaaactatgcttgctaagctttatattgaattgcttaatttacct
agagaaggaaaagatgcccttaaacttttaaattacagaacgcctactggaactcgtgga
gatgctggagactttgcaatgattgcatactttgtgttgaggccaaggtgtttaaagaaa
ggaagtttaactatacagcaggtaaatgaccttttagactctgttgccagcaataattct
gctaaaagaaaagacctaataaagaagagtcttcttcaacttataactcagagttcagca
cttgagcaaaagtggcttatacggatgatcataaaggatttaaagcttggtgttagtcag
caaactgtactttctgtttttcatgatgatgctgttgagttgcataatgtcaccacagat
ctggaaaaagtctgtaggcaacttcatgatccttctgtaggactcagtgatatttctatc
actttattttctgcctttaaaccaatgctagctgctatagcagatattgagcgcatcgag
aaggacatgaaacaccagagtttctacatcgaaaccaaactagatggtgagcgtatgcaa
atgcacaaagatgggactgaatataaatacttctccagaaatggatataattatactgat
cagtttggtgcttctccggatgagggttctctttccccattcattcataatgcattcaaa
acagatatacaagtctgtattcttgatggtgagatgatggcctataaccctaatacgcaa
actttcatgcaaaaggggattaagtttgatattaaaagaatggtagaagattctgaactg
caaacatgttattgtgtttttgatgtattgatggttaataataaaaaactaggacatgag
accctgagaaagaggtatgagattcttagtagtatttttatgccaataccaggtagaata
gaaatagtacaaaaaacacaagctcatactaagaatgaagtaattgatgcattgaatgaa
gcaattgataaaagagaagagggtatcatgataaaacatcctctgtccatttacaagcca
gacaaaagaggtgaaggatggttaaaaattaaaccagagtatgtcagtgaactaatggat
gaattggacatcttaattgttggagggtattggggtaaaggttcacggggtgggatgatg
tctcattttttgtgtgcagtagcagagaagccccctcctggtgaaaagccatctgtgttt
catactctgtctcgtgttggctctggttacactatgaaagaactgtatgatctgggtttg
aaattggccaaacattggaaaccttttcataaaaaagctccaccaagtagcattttattt
ggaacagagaagccagaagtgtacatcgaaccttgtaactctgtcattgttcagattaag
gcagcagagattgtccccagtgacatgtataaaactggctgcacattgcgttttccaaga
attgaaaagataagagatgacaaggagtggcatgaatgcatgactctggatgacttagag
caacttagagggaaagcatctggaaagctggcatctaaacatttttatgtaggtgtagat
gatgaaccacaggagaaaaagcggaaagctgccccaaagatgaagaaagttattggaatt
attgaacacttaaaagcacctaatctttctaatataaacaaagtttctaatatatttgaa
gatgtcgagttttgtgttatgagtggaacagccagccatccaaagactgacctggagaat
agaattgcagaatttggtggttatatagtacaaaatccaggcccagacacgtactgcata
attgcagggtctgagaacatcagggtgagaaacataatttcttcaggtgagcatgatgtt
gtcaagcctgcatggcttttagagtgttttaaggccaaaagctgtgtgccatggcagcct
cgctttatgattcatatgtgtccatcaacaaaaaaacattttgcccgtgaatatgattgc
tatggtgatagttattttgttgatacagatttgaaccaactgaaggaagtattctcagga
attaaaaattctaatgaacagactcctgaagaaatgtcttctgtgattgctgatttagaa
tatcggtattcctgggaccactctcccttcagtatgtttcgacgccacaccatttatttg
gacttgtatactgttattaatgatttgagtaccaaaactgaaggaacaagattagctatt
aaagccttggagcttcaatttcatggagcaaaagtagtttcttgtttagctgaaggagtg
tctcatgttatcattggggaagatcatagtcgagttgcaaattttaaagcttttagaaga
aattttaagagaaagtttaaaatcctaaaagaagattgggtaactgattcaatagacaaa
tgtgaattacaggaggaaaatcaatatttgatttaa
DBGET
integrated database retrieval system
