Lacticaseibacillus paracasei BL23: LCABL_17050
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Entry
LCABL_17050 CDS
T00723
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lcb
Lacticaseibacillus paracasei BL23
Pathway
lcb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LCABL_17050 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcb03400
]
LCABL_17050 (nth)
Enzymes [BR:
lcb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LCABL_17050 (nth)
DNA repair and recombination proteins [BR:
lcb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LCABL_17050 (nth)
Prokaryotic type
LCABL_17050 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
CAQ66786
LinkDB
All DBs
Position
complement(1646228..1646875)
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AA seq
215 aa
AA seq
DB search
MTDAEAKQLFDQIMALYPDPQPTLHAEDPFQILVAVMLSAQTTDVAVNAVTPKLFAAYPT
PADMAAAPVEAIAAIISRLGLYRTKAAHLKALSDILVKEYAGKVPNKAADLVRLPGVGKK
TATVVLSDAFNIPGVAVDTHVSRIVKGLGLVPQNATPVQIQARLEALMPPSEWIKLHRSL
IRFGREYLRARDPQVPAGTQWAFLETHYLPLGGKS
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatgctgaagccaaacaactatttgatcagatcatggcactttatcctgatccg
caaccaaccttgcacgccgaggatccatttcagattcttgtagccgtcatgttatcggcg
caaacgaccgatgtggccgtcaatgcggtcacgccaaagctttttgcggcttatccgacg
cctgctgacatggctgcagcgccggttgaggcgatcgctgcgatcattagccggctaggc
ctttatcgtactaaagctgcgcatttgaaagctttgagtgatattttggttaaggaatat
gcaggtaaggttcccaacaaagcggctgacttggtccgtttaccaggcgttggcaagaaa
acagccaccgttgttttaagtgatgcattcaacattccaggtgtggctgtggatacgcat
gttagtcgaattgtaaaggggttgggactcgtcccgcaaaatgcgacaccggttcagatt
caggcgcgactggaagccttgatgcccccgtcagaatggattaaacttcatcgcagccta
attcgttttggccgggagtatttgcgcgcccgtgatccgcaagtgccagcagggacgcaa
tgggcgtttttagaaacgcattatttacctttagggggcaaatcatga
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