Liberibacter crescens: B488_09870
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Entry
B488_09870 CDS
T02395
Name
(GenBank) RND efflux system, inner membrane transporter CmeB
KO
K18138
multidrug efflux pump
Organism
lcc
Liberibacter crescens
Pathway
lcc01501
beta-Lactam resistance
lcc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lcc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
B488_09870
01503 Cationic antimicrobial peptide (CAMP) resistance
B488_09870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcc02000
]
B488_09870
01504 Antimicrobial resistance genes [BR:
lcc01504
]
B488_09870
Transporters [BR:
lcc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
B488_09870
Antimicrobial resistance genes [BR:
lcc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
B488_09870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
SMC_N
Motif
Other DBs
NCBI-ProteinID:
AGA64979
UniProt:
L0ETW2
LinkDB
All DBs
Position
1074057..1077152
Genome browser
AA seq
1031 aa
AA seq
DB search
MAHFFINRPVFAWVIAIIITLSGVYLTFYVPVSEYPDIAPIKIMISAQYNGASAETVEKS
VTKIIEDSLDNLEHLIYMESSSTANKATVTLTFDNSTNPNTAQVEVQNKIQLIESKLPET
VRTEGVTVTRSSSSILLVAALVSTNNKYSTAELGNIVKTTIKDPIKRLSGIGDVSIFGSG
YAMRIWLDPFKLKKYNLTPLDVITAIKNQNTQVSVGSLGGQPTTKEQQITVTIVAQSQLT
QISDFESIILKTNTDGSFVKLANVARIEIGQETYGNNSFYNGRPASGFAVNLASGANAVS
TANNVLSTLSSLAKSLPEGTKVEIPYDTTPFIRSSIKNTLETLIEAIVLVFVIMLIFLQN
IRATIIPTITIPVVLMGTLATLSIAGYSINLLTMFAMVLAIGLLVDDAIVVVENVERVMR
EENLSPKEATKKSMSEITNAIIGIALVLSAVFLPMGFLSGSIGIIYRQFSITLISSMLLS
AIVALVLTPALCASILKPANEVSENKFFHLFNKIFEKINLKYISFVSNTFKHPLKMIVVF
MIICVMCLWIFKRIPSSFIPQEDKGSLMTIIQTPENATAYRTENILKKVQEYYINLPDVN
SVFGVLGFSFAGSKQNHAMLFNKLKDCFTCRLTAQLIAQHAMQYFSSIRDAKIFAVLPPE
INGLGNSGGFSMYLVDNKNQGQEALIQTAKTLIQTASKTGKVMSLRLQNGEAESQMKIIL
DQEKIGAMNVNIADVNSMLTTIFSGTYVNDFTYNNNRQPVIVQADSSWRMQPNQLGFWWV
RNTNKEMVPFSSFSKIKWIKGFAKLSRFNGTTAIKIDGSAANGVSNGTAMNEIENIVSSI
PGGYSIEWEGISYQEKLSGSQSLFLYMLSILVVFLCLAALYESWSIPFSVLLAIPISIFG
ALGAAMITNQSNDIYFKVSLLITIGLAAKNAILIVEFAKERTNKGMNVIAATLEASKLRL
RPIIMTSMAFIFGTLPLTLATGASSAAQHSVGIGVIGGIILSTFVGILFVPYFFVFINQI
SNLIKSLIKRI
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggcacatttttttatcaaccgtccagtttttgcttgggtgatagcaattatcataact
ctcagtggagtttatttaactttttacgtcccagtttcagaatatcctgatattgcacct
ataaagataatgatctctgctcaatataatggtgctagcgcagaaacagtagagaaatcg
gtaaccaaaatcattgaggattcgcttgataatcttgagcacctcatatacatggagtcc
tcttcaactgctaataaagctacagttacattgacttttgacaattcaacaaatcccaat
acagcacaggtagaagtacaaaataaaatacagctaatagaatcaaaacttcctgaaact
gtacgaactgaaggtgttactgtaactcgatcatcatcgtcaatactcttagtagctgca
ttagtttctacgaataacaaatactctacagcagaattagggaatattgttaagactacc
atcaaagatccaatcaagcgtttatctggtataggagatgtttcaatctttggatctggc
tatgccatgcgtatctggcttgatccgtttaaacttaaaaaatataacttgactccttta
gatgtaattacagctattaaaaatcaaaacacacaagtttcagttgggtctttaggagga
cagccaacaacgaaagaacaacaaataactgttactattgtagcacaaagtcaattgaca
caaatttcagattttgaatcaatcattcttaaaacaaatacagacggtagctttgtaaaa
ctagctaatgttgcaagaattgaaataggacaagaaacttacggaaacaattccttttat
aacggacgccctgcttctggttttgcagtaaatcttgctagtggtgccaatgccgtaagc
actgctaataatgtactttccaccctctcctctctcgcgaaaagtcttccagaaggaaca
aaagttgaaataccttatgatacaacaccttttatacgatcttcaataaagaacacatta
gaaacccttattgaagcaattgtgttagtctttgtaatcatgttaatattcttacaaaac
ataagagcaacaattataccaacaattacaatccctgtagtattgatgggaacattagca
actttatcaatagcaggatattctataaatttattgactatgtttgcaatggtattagct
attggtttattagtagacgatgctattgtagttgtagaaaatgttgaacgcgttatgcga
gaagaaaatctatctcctaaagaagcaaccaaaaaatcaatgtctgaaattacaaatgca
atcattggtatcgcacttgttttaagtgctgtttttcttcctatggggtttttaagtgga
tctataggtattatttatcgccaattttctataactcttatttcttctatgttgctatca
gccatagttgcacttgtactcactccagcattatgtgccagtattcttaaacctgcaaac
gaggtatctgaaaataaattttttcatctttttaataaaatttttgaaaaaattaatctg
aaatatatatcatttgtaagtaatacctttaaacaccctctaaagatgatagttgttttt
atgataatatgtgtcatgtgtttatggatatttaaacgtatcccttcttcttttatacct
caagaagacaaaggatcgttaatgactataattcaaacccctgaaaatgccactgcatac
cgtactgaaaatatactgaaaaaagtacaagaatattacataaacttgccagatgtaaat
tctgtttttggggtacttggtttttcttttgctggtagtaaacaaaaccatgctatgtta
tttaataaattaaaagattgttttacatgtagattaactgcacaattaattgcccaacat
gctatgcagtatttttcaagtatacgtgatgctaaaatttttgctgtattgccaccagag
ataaatggcttagggaattctggcggtttttctatgtaccttgtagataataaaaatcaa
ggacaggaagctctcatacaaactgcaaaaactctcatacaaactgccagtaaaactgga
aaagtgatgtcactgcgtctacaaaatggcgaagctgaatcacaaatgaaaattatcctt
gatcaagaaaaaataggagctatgaatgtaaatattgcagatgttaactcaatgcttaca
actatcttttctggaacttatgttaatgactttacttataataacaatagacagcctgtt
attgtgcaagctgattcttcatggcgtatgcaaccgaatcaacttgggttttggtgggta
agaaataccaacaaagaaatggtacccttctcatctttctctaaaataaaatggattaaa
ggatttgcaaaattatcacgttttaatggaacaacggctattaaaatagatggctctgct
gctaacggtgtttctaacggtactgcaatgaatgaaatagaaaatatagtttctagcatt
cctggtggatattcaattgaatgggaaggtatttcatatcaggagaagttgtcgggttca
cagtccttattcttatatatgttatcaatattggttgtctttttatgtctagctgctctt
tatgagagttggtctataccattttcagttctcttggcaattcccataagcatatttggt
gcgcttggagcagctatgattactaatcaatccaatgatatatatttcaaagttagcctc
ttgatcacaataggcttagcagctaagaacgctattctgattgtagaatttgccaaggag
cgcaccaataaaggaatgaatgtaattgccgcaactttagaagcctcaaaattacgttta
agacccataataatgacttcaatggcttttatttttggtactttacctttaacattagca
actggagcaagctcagcagctcaacattctgtaggaattggtgttattgggggtattata
ctatcaacttttgttggaatattatttgtcccttacttttttgtattcatcaatcaaatc
tctaatttgataaaaagtttgataaaaagaatatag
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