Legionella clemsonensis: clem_08965 Help Entry clem_08965        CDS       T05016                                  Symbol ligA_1 Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism lcd  Legionella clemsonensis Pathway lcd03030   DNA replication lcd03410   Base excision repair lcd03420   Nucleotide excision repair lcd03430   Mismatch repair Brite KEGG Orthology (KO) [BR:lcd00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     clem_08965 (ligA_1)    03410 Base excision repair     clem_08965 (ligA_1)    03420 Nucleotide excision repair     clem_08965 (ligA_1)    03430 Mismatch repair     clem_08965 (ligA_1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:lcd03032]     clem_08965 (ligA_1)    03400 DNA repair and recombination proteins [BR:lcd03400]     clem_08965 (ligA_1) Enzymes [BR:lcd01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      clem_08965 (ligA_1) DNA replication proteins [BR:lcd03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      clem_08965 (ligA_1) DNA repair and recombination proteins [BR:lcd03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      clem_08965 (ligA_1)    NER (nucleotide excision repair)     GGR (global genome repair) factors      clem_08965 (ligA_1)    MMR (mismatch excision repair)     DNA ligase      clem_08965 (ligA_1)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       clem_08965 (ligA_1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD HHH PTCB-BRCT RNA_pol_A_CTD A24_N_bact Motif Other DBs NCBI-ProteinID:  ASQ46344 UniProt:  A0A222P3A7 LinkDB All DBs Position complement(2035152..2036636) Genome browser AA seq 494 aa AA seqDB search MPKAGFEAYNAKARMTGEKVFANPRNAAAGSLRQLNAAITASRPLAIYYYGIGACENFEL PDSQFAQLELLKRWGFRVSSETQKATGLQGCLDYYNAMLKRRLDLPYEIDGVVYKIDSIK LQRELGFVARAPRFACAHKFPASEEITELLAVDFQVGRTGALTPVARLKPISVAGVTVSN ATLHNMDEIQRKDIRIGDTVIVRRAGDVIPEVVSVVVERRPSETHLIHLPAHCPVCGADV IREEGEAVARCTGGLFCSAQLKRMLWHFASRKAMAIDGLGAGIIELLVEENLVKDVADLY TLDLETLANLPRMGKKSAENLLEALEKSKNTTFPRFLYALGIREVGEVSARVLATAFPDI DSLKAASVEQLMGLKDIGPVCAHHVVHFFAQTHNGEVIDKLLAYGVHWPQEEYKPVDEQH PFFGKTLVLTGTLNSMGREEAKARLITVGAKVSGSVSRKTDFVIAGTEAGSKLDKALELG VRVLNEDEFLALLT NT seq 1485 nt NT seq  +upstreamnt  +downstreamnt atgccgaaagctggtttcgaagcttataatgcaaaggccagaatgactggcgagaaggtt tttgctaatccacgtaatgctgctgcaggaagtttacggcagttgaatgcggcaattacg gcttctcgccccttggctatttactactatggcattggtgcctgtgaaaattttgaatta ccagatagtcaatttgctcaactcgaactgcttaagcgctgggggtttagagtatccagc gaaactcagaaagcaacaggtttgcaggggtgccttgactactacaatgccatgttaaag cgtcgactggatttaccttatgaaattgatggcgtggtttataaaatagacagtatcaaa ttgcagcgtgaactaggatttgtcgcgcgtgctcctcgttttgcctgcgctcataagttt cccgccagtgaggaaataacagagctgttagcggttgactttcaagtggggcgtacgggc gccttaacacccgttgcccgtttaaaaccgatcagcgtggctggtgtaaccgttagcaat gccacgctgcataatatggatgaaattcagcgcaaggatatacgtattggtgacacggtt attgtccgtcgtgctggcgatgtaatccctgaggtggtttccgtggtagtagaacgacgt ccctcagaaacacacctcattcatttacctgctcattgtcctgtatgtggggcagatgtt atccgtgaagaaggtgaagcggttgcacgctgtaccggtggcttgttttgcagcgctcaa ctaaaacgtatgctttggcattttgcctcaagaaaagccatggctattgatggtttgggg gccggaattatcgagttgctggttgaggaaaatttagtgaaagatgttgctgatctctat accttagatttggaaacactggcaaatcttcctcgaatgggtaaaaaatccgcagagaat ttactcgaagccctggaaaaaagtaaaaataccacgtttccccgcttcttatacgcgcta ggtatacgagaagtaggtgaggtcagtgcgcgagttctggctacggcgtttccggatatt gactccttaaaggctgcttctgttgaacagttaatggggttgaaggatattgggccagtc tgcgcccaccatgtggtgcacttttttgcgcagactcacaatggtgaggttattgataaa ctattggcttatggagtgcattggcctcaggaagaatataagcctgttgatgagcagcat ccattttttggtaaaacgctggttcttacgggtacgttgaacagcatggggcgagaagag gcaaaggctcgtcttataacagtcggggctaaggtttctggcagtgtttctcgtaaaact gactttgtcattgcaggaacggaagcgggctctaaactggataaagcgctggagttgggt gttagggtactgaatgaagatgaatttcttgctttgctcacttga

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