Lacticaseibacillus paracasei LC2W: LC2W_1655
Help
Entry
LC2W_1655 CDS
T01956
Symbol
nth
Name
(GenBank) Putative endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lce
Lacticaseibacillus paracasei LC2W
Pathway
lce03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LC2W_1655 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lce03400
]
LC2W_1655 (nth)
Enzymes [BR:
lce01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LC2W_1655 (nth)
DNA repair and recombination proteins [BR:
lce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LC2W_1655 (nth)
Prokaryotic type
LC2W_1655 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AEA53988
UniProt:
A0A0K1MU40
LinkDB
All DBs
Position
complement(1607317..1608006)
Genome browser
AA seq
229 aa
AA seq
DB search
MKIHPSLAQEEAPFVTDAEAKQLFDQIMALYPDPQPTLHAEDPFQILVAVMLSAQTTDVA
VNAVTPKLFAAYPTPADMAAAPVEAIAAIISRLGLYRTKAAHLKALSDILVKEYAGKVPN
KAADLVRLPGVGKKTATVVLSDAFNIPGVAVDTHVSRIVKGLGLVPQNATPVQIQARLEA
LMPPSEWIKLHRSLIRFGREYLRARDPQVPAGTQWAFLETHYLPLGGKS
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcatccatcattagcccaagaggaggcaccatttgtgaccgatgctgaagcc
aaacaactatttgatcagatcatggcactttatcctgatccgcaaccaaccttgcacgcc
gaggatccatttcagattcttgtagccgtcatgttatcggcgcaaacgaccgatgtggcc
gtcaatgcggtcacgccaaagctttttgcggcttatccgacgcctgctgacatggctgca
gcgccggttgaggcgatcgctgcgatcattagccggctaggcctttatcgtactaaagct
gcgcatttgaaagctttgagtgatattttggttaaggaatatgcaggtaaggttcccaac
aaagcggctgacttggtccgtttaccaggcgttggcaagaaaacagccaccgttgtttta
agtgatgcattcaacattccaggtgtggctgtggatacgcatgttagtcgaattgtaaag
gggttgggactcgtcccgcaaaatgcgacaccggttcagattcaggcgcgactggaagcc
ttgatgcccccgtcagaatggattaaacttcatcgcagcctaattcgttttggccgggag
tatttgcgcgcccgtgatccgcaagtgccagcagggacgcaatgggcgtttttagaaacg
cattatttacctttagggggcaaatcatga
DBGET
integrated database retrieval system
