KEGG   Lates calcarifer (barramundi perch): 108872906
Entry
108872906         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: lysine (K)-specific demethylase 2Aa
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    108872906
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lcf03000]
    108872906
   04121 Ubiquitin system [BR:lcf04121]
    108872906
   03036 Chromosome and associated proteins [BR:lcf03036]
    108872906
Enzymes [BR:lcf01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     108872906
Transcription factors [BR:lcf03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    108872906
Ubiquitin system [BR:lcf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     108872906
Chromosome and associated proteins [BR:lcf03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    108872906
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     108872906
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JHD JmjC F-box DUF7885 PHD Cupin_8 C1_1
Other DBs
NCBI-GeneID: 108872906
NCBI-ProteinID: XP_018516336
UniProt: A0AAJ7LAA7
LinkDB
Position
LG5:complement(11029367..11044480)
AA seq 1246 aa
MDDSKPRYSKRLRAGTRRRYHDDGISDEEIDGRRMFDLEEKVNSQRFNSDRVLHMEGKDL
TYEFIQRGGLRDPIIFEKPDGLGIKMPDPDFSVNDVKMFVGSRRMIDVMDVSTQKGTEMS
MAQWTRYYETPPSQREKLYNVISLEFSHTKLENLVKRPATVDLIDWVDNMWPRHLKERQR
DSTNSINDMQYPKVQKYCLMSVEGCYTDFHIDFGGTSVWYHILRGSKVFWLIPPTPQNLE
LYENWVLSGKQGDVFLGDRASDCQRIELKQGCTFIIPSGWIHAVYTPVDSMVFGGNFLHS
FNIPMQLNICNIEDRTRVPVKFRYPFYYEMCWYVLERYVFSLTKISYLTPEFQKHSLGIG
LKKPPGPDPASEQVKEEVGGSSDGEASEQQSDKSAAKVHLTPLELEGLWNLLGKLETLPS
NKKCVPAGIHNAPALITHIKALLKEHSSDNPKLSYTGKPIIKWPKRPSWYQPPPPPPPPP
RPKLASTPIIPRPQKPASSMSVLRRRRVRCKRCEACMRPECGDCNFCRDMKKFGGPGKLK
QTCVLRQCLSPGLPLSAVCEICKEPNQEESGDPSLTLMECSNCAQIVHPACLTVQGEGVV
NKDLPSCWECPKCVQGITDPEQSKGDKGEGHPVKRKSSSLLDARMAKIYRRQRHSHDGDD
SASDDDDEAAQRRKMALHARGGSQSTRRGFGANRRGLLRGGSAQRGSRGGLMAPGSSSIL
KLKRGMGMRESGRRGRGVRLRGGSRMQRRGDETEESDDDDDDEEEEEEEEDSEDGDKERR
HRQRRRRRRTDDDEDEDEDSEGQEFDPEEEEMDTLEDEEEEEEEEVEGDGRWDSDPEPPV
LLVSDLNDDLLSGSYLTVTLQRPHKAKRQFGSIVPKLEAAMGPRTAAAVSSGQQGFIQRK
SALSKPARLKSTDATADGVTPRGPGRPRLRAIHGDRGTRDRSVSSSEEQEAAAPPASSSL
SPPSLLSLPSFKDVGNEKGGEKEVWVSVFRYLSRAELLACMTVCKAWYKWSCDKRLWSHV
DVSRCSPLSNQALAGIIKRQPTSLDLSWTPLAKRQLNCLLTRLPGLRELRVTGLSWSCLS
ALVSPTLPYLRLLDLRWCEGLKDTQIKEIITPPGSESSRSRLRNMVTLRLSGLDISESTL
RLLQRHMPQLERLDLAHCRDIMDSSIALLAAAGTHTRNNLTELTLAGCSELTDGCLSYLK
RLSSLTLLDLRGCKGVSRRACDAFISDLSHVALYCMMEEKLIQRLD
NT seq 3741 nt   +upstreamnt  +downstreamnt
atggatgattccaagccacggtacagcaaaaggctgcgggctggaacccgtcggcgttac
catgatgatggtatttctgatgaggagattgatggaaggaggatgtttgacctggaggag
aaagtcaacagtcagaggttcaactctgaccgggtccttcacatggaggggaaagacttg
acatatgagttcatccagagaggtggtctgagggacccgatcatcttcgagaagccggat
ggattgggaatcaagatgcccgatcctgacttcagtgttaatgacgtcaagatgtttgtt
ggtagcagacgtatgatagatgtgatggacgtgagtactcagaaggggacagagatgtcc
atggcccagtggacacgttactacgagacccctccatcccagagagagaagctctataat
gtcattagcctggagttcagccacaccaagctggagaacctggtcaagagacctgccaca
gtggatctgatagactgggtggacaacatgtggcctcgtcacctgaaagagagacagaga
gactcaacaaactctattaacgacatgcagtaccccaaagtacagaaatactgtctgatg
agtgtcgagggctgctacacagactttcacattgacttcggagggacctctgtgtggtat
cacatcctgagagggagcaaggtgttctggctgatccctcccacccctcagaacctggag
ctgtatgagaactgggtgctgtcagggaaacagggagacgttttcctgggcgacagagca
tctgactgccagaggattgaactgaagcagggctgtaccttcatcataccctcaggttgg
attcatgctgtctacacccctgtggactctatggtgtttggaggaaacttcctgcacagt
ttcaatatccccatgcaacttaacatctgtaacatagaggaccgaacacgggttccagtt
aagtttcgttatcccttctactacgagatgtgctggtacgtgttggagcgttacgtcttc
agcctgaccaagatctcctacctcactccagagttccagaaacactcactgggcattggt
ctgaagaagccgcctggccccgatccagctagtgagcaggtgaaggaggaggtgggtggc
agcagcgatggagaggcttcagaacaacagtctgacaagtctgcagctaaagttcacctg
actcctctcgagctggaggggctgtggaacctgctgggtaaactggagaccctgccctcc
aataagaagtgtgtcccagcagggatacacaatgccccagcactcatcacacacatcaag
gcactactgaaagaacacagcagcgataatcccaaactgtcctacacaggaaaacccatc
atcaagtggccaaagagaccctcatggtaccagccaccacctcctccaccacctcctcct
cgtcctaagctggcctctacacccatcatcccacgaccacagaaaccagcctcctccatg
tctgtgttgagacggcgcagggtcaggtgtaagcgctgtgaagcctgtatgagaccagag
tgtggagactgtaacttctgcagagacatgaagaagtttggaggaccggggaagctcaag
cagacctgtgttctgcgacagtgtctctctccgggccttcccctgtctgcagtgtgtgag
atctgcaaggagcccaatcaggaggaaagtggagatccatccctcaccctgatggagtgc
tccaactgtgcacagatagtccatcctgcctgcctcacggtccagggtgaaggagtggtg
aataaagacctgcccagttgttgggagtgcccaaagtgtgtccaaggaatcactgaccca
gagcagtctaaaggcgacaaaggtgaaggccatccagtgaagcgcaaatcttcctccctc
ctggacgctcgtatggctaagatttacagacggcagagacacagccatgatggagatgac
tctgccagtgatgacgatgatgaagctgcccagagaagaaagatggcgctccacgctcgg
ggagggagccagtccaccagaagagggtttggtgccaacaggagaggcctgttaagagga
ggctcagctcagagaggaagcagaggagggctcatggctcccggctcctcctccatcctc
aagctaaagcgagggatgggcatgagggagagcggccggaggggacggggggtgaggctg
cggggaggctccaggatgcagcgacgaggggacgagactgaggagtctgacgacgacgat
gacgatgaagaggaggaggaggaggaagaggacagcgaagacggagacaaagagcgacgg
caccgtcagcgtcggaggaggcgcaggacagacgacgatgaagatgaagatgaggacagt
gagggacaggagtttgaccctgaagaggaggagatggacacactagaggatgaagaggag
gaagaggaggaggaggtagaaggagacgggcgctgggattcagacccagaacccccagtt
ctcctggtgtctgatctgaacgatgacctgctgagtggctcctacctgactgtcaccctt
cagcgccctcacaaggccaagagacagtttggctccatcgttccaaagctggaagcagcc
atgggtccgaggacggctgcagcggtttccagtggtcagcagggcttcatccagagaaag
tcggcactgtccaaacctgcacgactcaagagcaccgacgccaccgctgacggtgtaacg
ccaagaggacccggcaggccgcgtctgcgggctatccacggtgacagaggcactagagat
cgttctgtatcttcttcagaggaacaggaagctgctgctcctcctgcatcctcctccctg
tctcctccatccctgctgtctctgccctcctttaaggatgtgggtaatgagaaaggaggg
gagaaggaggtgtgggtgtcagtgttcagatacctgagcagagccgagctgctggcctgc
atgaccgtctgtaaggcctggtacaagtggagctgtgacaagcgtctgtggagtcacgtg
gacgtgagtcgctgcagcccgctcagtaaccaggccctggcgggcatcatcaaacgccag
cccacctctctggacctgtcctggaccccgctggccaagagacagctcaactgtctgctc
accaggctcccaggtctgagggagctgagggtgactggtctgtcctggtcctgtctgtca
gctctggtctctccaactctaccctacctgcggttgctggacctgcgctggtgtgaaggc
cttaaagacacccagattaaagagatcatcaccccacctggttcagagtcatctcgcagc
agactgaggaacatggtgacactgcgtctgtctggtttagacataagtgagtctactctg
aggctgctgcagcgccacatgcctcagctggagaggctggacctggctcactgcagagac
ataatggactcatccattgctctgctggcagctgccgggactcacacccgcaacaacctc
accgagctcacgctggcaggctgtagtgaactgaccgatggctgtctatcctacctgaaa
cggctctcgtctctgactctgctggacctcagaggctgtaagggcgtcagcagacgggcc
tgtgatgccttcatctctgatctgtctcatgttgccctctactgtatgatggaggagaag
ctcatccagcgcctggactaa

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