Lates calcarifer (barramundi perch): 108873260
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Entry
108873260 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: suppressor of cytokine signaling 7-like
KO
K04699
suppressor of cytokine signaling 6/7
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108873260
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
108873260
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Gene cluster
GFIT
Motif
Pfam:
SOCS_box
SH2
Motif
Other DBs
NCBI-GeneID:
108873260
NCBI-ProteinID:
XP_018516948
UniProt:
A0AAJ7LAC6
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Position
LG11:complement(50926..61801)
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AA seq
916 aa
AA seq
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MNDAQQEMSPDFVLMRLVSAAEYDRLDEPDDLMSGGGGFGPVKAVLGHHGGGFDLDPSGP
SAGLGSASPHYSSPLPGKGELDGGLVLTQAPPGSEAPLSPPPPEDFAVAAQRFVDFPVPH
GHGSGGHGSRAQLMVFQNLLRSGDRILECGLEQLPPGFLREEAERQRQQLDSGSGTGPGG
TTAGPGPGGGKDQNSHCIPSAEENLQPPPQLLQWHPVLRLSKGSDGSQTPQQGVPALNSE
SGSVLCHRHRLLTDRLAKWPPGLLDQALRLGLLEPRKNCPAGGEDPVLALARRLGQLGEG
REGGGGGGGEDMVLPLPRCSCHSVLASGTGGEDPSETSDALLVLEGLGSEEVGEARDRGD
VGDTEKGETSGGAGPVFSSGTLSGLMRQVHRLAEEAGVCTDQTCRSSLAVLGAAVSLPPC
VDSRPPVGTTVPCPYPPVRPQAPQAAVTLSGLQVSPDPLLSSGPDPIHRPQHQHQSRSQP
QSRATTPKLGVASGGAGRSASPLVVLEGEVGGGRDGEKTPRGKSRKGGSLKVRLSKLFRT
KSSSGGSGGLLDKRPSLASSTSSGGSLLDVWGSTCSNMEQDSSRLQVSRPHSAFSPVPFS
PAFTGETVSLVDVDISRRGXELSSPPDSSSPPRRSLSLLDDFGGPPQQQGPFLERGVGAS
MQSLPPRPLALPPPLSTIQHSLSLNDTFLRGLPRPVPLRPDGQHLPPRLAARCPLSRPDA
SSFATSLRELEKCGWYWGPMNWEDAEMKLKGKPDGSFLVRDSSDPRYILSLSFRSQGVTH
HTRMEHYRGTFSLWCHPKFEDRCHSVVEFIERAIMHSKNGKFLYFLRSRVPGLPPTPVQL
LYPVSRFSSVKSLQHLCRFCIRQLVRIDHIQELPLPTPLIAYLRKFYYYDPEEEINPTLK
ERGPEPSSQPGVESQT
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgcgcagcaagaaatgtccccggacttcgtcctgatgcggctcgtgtccgcg
gccgagtacgaccgactggacgagcccgacgacctgatgtccgggggcggcgggttcggg
cccgttaaagccgtgctgggacaccacggcggcgggtttgatctggaccccagcggcccc
tcggcgggcctcggctcggcctccccgcactacagctcgccgctccccggaaaaggcgag
ctggacggcgggctggtgctgacgcaggccccgccgggctccgaggcgccgctgtcgcct
ccgccgccggaggactttgcggtagcggcccagcggttcgtggacttcccggtgccgcac
gggcacggttccggggggcacgggtcgagggcgcagctgatggtgtttcagaacctgctg
cggtccggagaccggatcctggagtgcgggctggagcagctgcccccggggttcctccgg
gaggaggcagagagacagagacagcagctggactcgggatcaggaaccggtcccggcggc
acaacagccggtcccgggcccggaggcgggaaggaccagaactcacactgtatcccgtct
gcagaggagaacctgcagccgccgccgcagctcctccagtggcacccggtcctcagactg
tccaaaggctctgacgggtcccagactcctcagcagggcgtcccggctctgaactctgag
tctgggtcggtcctgtgccacagacaccgcctgcttacagacagactggctaaatggccc
ccgggcctgctggaccaagccctgcgcctgggtctgctggagcccaggaagaactgcccg
gccgggggagaggacccggtcctggctctggcccggaggctgggtcagctgggtgagggg
agggaggggggaggaggaggtgggggggaagatatggttctcccgctccctcggtgctcc
tgtcacagcgtcctggcctcggggacggggggcgaggacccaagtgagaccagcgatgcc
ctgctggtcctggagggtctggggtccgaggaggtgggggaggccagggacaggggggat
gtgggggacactgagaaaggagagacatctgggggggcggggccggtgttctccagcggg
actctgagcggtctgatgcggcaggtccacagactggccgaggaggcgggggtctgcacc
gaccagacctgcaggtcctcgctggctgtcctgggtgccgcggtgtccttacccccctgc
gtggactcccgcccccctgttggcaccaccgtaccctgtccttacccccccgtccgcccg
caggccccccaggcagcagtgaccctcagtggcctccaggtctcccccgaccccctcctg
tcctcaggccctgacccaatccaccgcccccagcatcagcaccagtcccggtcccagccc
cagagccgcgccaccacccccaaactcggcgtggcctcagggggagcggggcggtctgcc
tcccccctggtggtcctggagggggaggtgggaggagggagggacggggagaagacgccg
cgggggaagtcgaggaaaggggggtccctgaaggtccggctcagcaaactgttcaggacc
aagagctccagcggggggtcgggggggctcctggacaagaggccgtccctggcctcgtcc
acctcgtccgggggaagtctgctggacgtgtgggggtcgacctgcagcaacatggagcag
gacagcagcaggctgcaggtgtccagacctcacagtgccttctctccggtgcccttcagt
cctgctttcactggtgagacggtgtctctggttgatgtggatatttctcggagggggnng
gaactctcttcaccccccgactcctcctccccgcccagacggagcctcagtctgctcgat
gatttcgggggtcctcctcagcagcagggtccgttcctggagcgcggcgtcggggcgtcg
atgcagtctctgcccccccgacctctggccctgcccccccccctgagcaccatccaacac
agcctgagcctcaatgacaccttcctcagaggtctccctcggcccgtccctctgcgtcct
gacggtcagcacctcccacccagactcgctgcccgctgtcccctcagtcgacccgacgcc
agcagcttcgccaccagcctcagagaactggagaagtgtgggtggtactggggaccgatg
aactgggaggacgctgagatgaagctgaaggggaaacctgacgggtcgttcctggtccgg
gacagttcagatccacgatacatcctgagtctgagcttcaggtcccagggagtcacacac
cacacacgcatggagcactacagaggtacgttcagtctgtggtgtcatcctaagtttgag
gatcgttgtcactctgtggtggagttcatagagagagccatcatgcactccaagaatggg
aagttcctctacttcctgcgctccagagtccctggtctgcctccgaccccggtccagctc
ctgtacccggtctccaggttcagcagcgttaaatctctgcagcatctctgccgcttctgc
atcagacagctggtccgtatagaccacatccaggagctgccgctgcccacgcctctgatc
gcctacctgaggaagttttattactacgaccccgaggaggagatcaacccgacactgaag
gagcgaggaccagagccaagcagccagccgggggtcgagtcccaaacgtag
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