Lates calcarifer (barramundi perch): 108874038
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Entry
108874038 CDS
T04895
Name
(RefSeq) SHC-transforming protein 3
KO
K17448
SHC-transforming protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04012
ErbB signaling pathway
lcf04510
Focal adhesion
lcf04910
Insulin signaling pathway
lcf05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04012 ErbB signaling pathway
108874038
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108874038
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
108874038
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
108874038
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Gene cluster
GFIT
Motif
Pfam:
PID
SH2
DUF7145
DUF7063
Delta_lysin
PGM_PMM_IV
Motif
Other DBs
NCBI-GeneID:
108874038
NCBI-ProteinID:
XP_050928885
UniProt:
A0A4W6CHL5
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Position
LG9:13483076..13508957
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AA seq
678 aa
AA seq
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MLHRTKYNRFRNESVTSVDELLHGLSMNPKVSATPQSAAETSYTPPTEVQPSSTTTASST
PTSHSSDHLEDGGTTLCTLINKVSSLKFSNSGSLLGIKGLPSAVKDLAVSKLQGGGGSGS
GSSSGPSPSAATAAAATAAAAASGVGGSLCSSASHSTPCSQLEPAVSMSKKSRLDELQPG
GEDWNPGGGGGLVSKPSRGWLHSSEKISGPGVTYIVKYLGCIEVLRSMRSLDFTTRSQIT
REAISLVCEAVPGTKGALRKRKPPSKALSSILGKSNLQFAGMSINLNISTSSLNLMTPDC
KQIIANHHMQSISFASGGDPDTTDYVAYVAKDPVNRRACHILECSDGLAQDVISTIGQAF
DLRFQQYLQCPSSKMSSTHDRVLNMEELPWTEEEEESAEHPYYNNIPGKMPPPGGFIDTR
LTNQNAALDGCQMGPGSVDQTYYQGRHCGENWGDERKPIFIQQGSFDISSLPESKGQAPK
TTEMPTYVNTQQIDAQVLAALQAEAENVTKGMAAAAKESPQKDLFDMKPFEDAIQSQSHP
PSQGQAQSQMSGLHKVASVDNSSPLLVRSLAFRAQEELEGQTWYHGKMSRRDAEKLLKED
GDFLVRKSTTNPGSYVLTGMHNGLAKHLLLVDPEGTVRTKDHVFDSISHLIGHHRDNNLP
IVSAGSELCLLQPVGRKQ
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaccgtaccaaatacaaccgcttcaggaatgagtcagtaacatccgtcgatgag
cttctgcacggcctgtccatgaaccccaaggtctcggccaccccccagtctgcagccgag
acatcttacacacctccgactgaggtccagccctcctccaccaccactgcttccagcacc
cccaccagccacagctctgaccacctggaagatggaggcaccaccctctgtaccctcatc
aacaaggtgtccagcctgaaattcagcaactcaggcagcttgctgggcatcaagggtctg
ccctcggctgtcaaggacctggctgtgtctaagctgcaggggggtgggggatcgggctca
ggcagctccagtggcccgagccccagcgcggcgacagcagcagcagcgacggcagcagca
gcagcctctggtgtgggcggctctctgtgcagctcggcctcccattcaaccccctgctcg
cagctggagccagctgtcagcatgagcaagaagagcaggctggacgagctccagcccggt
ggagaggactggaatccaggtggaggtggtggactggtgagcaaaccctcaagaggatgg
ctacattcaagcgagaagatctctggtccaggagtgacatacattgttaagtaccttggc
tgtatagaagtccttcggtcaatgagatccttggatttcaccacaaggtcacaaataaca
agggaagccatcagcctggtgtgtgaggctgttccagggaccaaaggagctctgcggaag
agaaagccaccgtccaaagctctgtccagtatcctgggcaagagcaacctgcagttcgct
ggcatgtctatcaacctaaatatctccaccagtagcctcaacctgatgacacctgactgc
aaacagatcatagccaaccatcacatgcagtccatctcctttgcatcaggtggagaccct
gacacgacagattatgttgcctatgtagcaaaggaccctgttaatagaagagcatgtcac
atcctggagtgctctgatggtctggcccaagacgtcatcagcaccattggccaggccttt
gaccttcgcttccagcagtacctgcagtgtccctcaagcaagatgtcctccacacatgac
agggtattaaacatggaggagttaccatggacagaggaggaggaggagtcagcagagcat
ccttactataacaacatccctggcaagatgccaccacccggaggcttcatcgacacccgg
ctgaccaatcagaatgcagcactcgatggatgccagatgggcccaggttcagtggaccag
acatattaccaaggacggcactgtggagaaaactggggagatgaaagaaagcccatattc
atacaacagggatcatttgatataagcagtctgcctgagagtaaaggtcaggcaccaaaa
acaacagagatgcccacatatgtgaacacccagcagattgatgcccaggtgctcgcagcg
ctccaggcagaggcagaaaatgtgacaaagggcatggcagctgcagccaaagagagccca
cagaaggacctgtttgacatgaagcccttcgaagacgctattcagtctcagtcccatcca
ccatcccaggggcaagctcagtcccagatgtctggtcttcataaggtggcatccgtggac
aactcgagccctcttcttgtgcgttcgctggccttccgggcacaggaggagctggagggc
cagacttggtaccatggcaaaatgagccgccgtgacgctgaaaaacttctgaaagaagat
ggcgacttcctggtccgcaagagcactaccaacccagggtcctacgtactgacgggcatg
cacaatggacttgccaaacacctactgctggtggaccctgagggcacggtacggacaaaa
gatcatgtatttgacagcattagccaccttattggtcatcaccgtgacaacaatctgccg
attgtgtcagccgggagtgaactgtgtctcctacagcccgtcggaaggaaacagtga
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