Lates calcarifer (barramundi perch): 108874937
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Entry
108874937 CDS
T04895
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00310
Lysine degradation
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108874937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108874937
03036 Chromosome and associated proteins [BR:
lcf03036
]
108874937
Enzymes [BR:
lcf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
108874937
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
108874937
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
108874937
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2H2_11
zf-C2H2_15
Mito_fiss_reg
Motif
Other DBs
NCBI-GeneID:
108874937
NCBI-ProteinID:
XP_018519048
UniProt:
A0AAJ7LD93
LinkDB
All DBs
Position
LG13:complement(26394773..26495491)
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AA seq
650 aa
AA seq
DB search
MLKPGDPSGSAFLKVDPSYLQHWQQLFPQAQLKAPLAPPPPPPDRLSIPVDSLRPSRLHS
HLLSSTHCTSSSSSSSTSSSAASSSAAAAAAAALTPSSSISISASAGLSQLPVPQQIALF
GQALAPVCAGPGGPGGGGGPGGGGGGGGGGDLVVVVPPENQQGHNPAAGLLHQAKEHSCG
GVGVVSSSVKSSSSGGGGEEGGKGATTRFKLTSEELDYYLYGQQRMEIIPLSNHTGELNN
RCDMCADNRNGECPMHGPLHSLRRLVGTSSSAAPVTLPDVPDWLRDLPREVCLCTSTVPG
LGYGICAAQRIPQGTWIGPFQGVPLLLDKLQSGAVRNTRHLWEIYDAEGTLQHFIDGNDP
SKSSWMRYIRCARHCGEQNMMVVQYRSCIFYRACMDIPRGTELLVWYNDSYTSFFGIPLQ
CIAQDENLNVPATVVEAMTRQESLQSFSKNGKPSSSSSSSSTPSTTLMRSMVFPHSPCPR
SFSLLDKVGVGPQSDSSFGQLGSKNQRVLASPTSTSQLSSEFSDWHLWKCGQCFKTFTQR
ILLQMHVCPQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLN
NHIRTHTGEKPFKCERCDRSFTQATQLSRHQRLPNECKPVNESSESIEVD
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagccgggcgacccgagcggctcagccttcctgaaggtggacccgtcctacctg
cagcactggcagcagctcttccctcaggcgcagctgaaggctcctctggccccgccgccg
cctccacctgaccgcctctccatccccgtggacagcctgcgcccgtcccgcctgcacagc
cacctcctgtcctccacacactgcacctcctcctcctcctcctcttctacatcctcctca
gcagcttcttcttcagcagcagcagcagcagcagcagctctcaccccatcctcctccatc
tccatctccgcctccgcagggctctcccagctgcccgtgccccagcagattgcactcttt
gggcaggcgttagccccggtgtgtgccgggcctggaggtcctggaggaggaggaggacca
ggaggaggtggaggaggaggaggaggaggagatctggtggtggtcgtccccccggagaac
cagcagggtcacaacccagcagcggggctcctccatcaggccaaagagcatagctgtggg
ggggtgggggtggtgtcgtccagcgtgaagagcagcagcagcggaggaggcggcgaggag
ggcgggaaaggagcgacgacgaggttcaaactgacgtcggaggagctggactactacctg
tacggacagcagaggatggagatcatcccactgagcaaccacacaggagagctcaacaac
cgctgcgacatgtgtgcagacaacaggaacggcgagtgtccgatgcacggtcctcttcac
tccctgcgtcgactcgtcggcaccagcagctcggcggctcccgtcaccctgccggacgtc
cctgattggctcagagacctgcccagagaggtgtgtctctgcaccagcacagttcctggt
cttgggtacgggatctgtgcggctcagaggatccctcagggaacctggatcggcccgttt
cagggggtccctctgctgctggacaagctgcagtccggagccgtcaggaacacgcgacac
ctgtgggagatctacgatgcagaggggacgttacagcactttatcgatggtaatgatccc
agtaaatccagctggatgaggtacatccgctgtgccagacactgtggagagcagaacatg
atggttgtacagtacaggtcctgtatcttctacagagcgtgcatggatattcccagagga
acagagctgctggtttggtacaacgactcctacacctccttcttcggcatcccgctgcag
tgcatcgctcaggacgaaaacttaaatgtcccagccacagtggtggaggccatgaccagg
caggagtccctccaatccttcagcaagaacggcaaaccgtcctcctcgtcttcctcctcc
tctaccccctccaccaccctaatgcgctccatggtcttcccccactctccctgccccagg
agtttctccctgttggacaaggttggggttgggcctcagtcggactcgagcttcggccag
ctggggtcaaagaaccagcgagtcctggcgagtccaacctccaccagccagctgagcagc
gagttcagtgactggcatctgtggaagtgcggccagtgcttcaaaaccttcacccagagg
atcctgctgcagatgcacgtctgtccgcagaatcctgacagaccgtaccagtgtggccac
tgctcccagtccttctctcagccgtcggagctgaggaaccacgtggtgacgcactcgagc
gaccgtcccttcaaatgtggatactgcggccgggcgttcgccggcgccacgacgctcaac
aaccacatccgaacgcacaccggagagaagccgttcaagtgcgagcgttgcgaccgcagc
ttcacacaggccactcagctcagccgccatcagcgacttcctaacgagtgtaaaccggtg
aacgaaagcagcgagtccatcgaggtggattaa
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