Lates calcarifer (barramundi perch): 108875060
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Entry
108875060 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase MSL2a
KO
K13164
male-specific lethal 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108875060
03036 Chromosome and associated proteins [BR:
lcf03036
]
108875060
Spliceosome [BR:
lcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
108875060
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MSL complex
108875060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_10
MSL2-CXC
Motif
Other DBs
NCBI-GeneID:
108875060
NCBI-ProteinID:
XP_018519231
UniProt:
A0AAJ7LCS1
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Position
LG19:17214971..17220761
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AA seq
618 aa
AA seq
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MNPVNATALYVSASRAVLQCDPRQPNTFAEMYKLLPFFRQSLACLVCGKLLQDPISPSHS
ECQHYVCLGCKGQKMQIRPSCGRCKDSSCFQENKQLSLLVQCYRKLCLYVTHSPLLQLVS
SHVGGSPEVMALLEEVLMSHEEEMETEDPSLVQEDVNPSAPESLTPTEAPPVPAELSAVP
QSSSSGPPCSNGPQECNGEVLEDLDPSSPELEVCELVEEQPQAGLSVSSTGCGGLELSLT
TGPLAPTPGTVCSLRDGESSSRELEEGEVLLLSVEEVLQTLDPLQPSRDSPHTHPDRTHS
HTHIATDRAHAQMYIQLDAAHNYTQIQTDRTNTVASHGAHIHTSSFDPPPTSKPPPVRLN
RKRSHSESDREKVKPLPITSILQGSSSHVHTPNPSHTLHTQPPTPSLTVPAHTYSSLPNG
APPKPSRPAPNHSKGARKHVDPGPKKPHTKARSGGGSKTKDRSKDQRLMSGCLVPPAPVR
PPYKKPVEKKGCKCGRATQNPSVLTCRGQRCPCYSNRKACLDCICRGCQNSYMANGEKKL
EAFAVPEKALEQTRLTLGINLTSITAAAALRNPATTSIRANTLLNVATGNGTPVTTAFLS
PSPPQEPNYEDSLELLIG
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccgttaatgcaaccgctctgtacgtgtccgccagccgggccgtgctgcagtgt
gacccacggcagcctaacaccttcgcagagatgtacaagctactgcctttcttccgtcag
tccctcgcatgccttgtctgtggtaaactgctccaggatccaatttccccatcgcactca
gagtgtcagcattatgtctgcttgggctgtaaaggccagaagatgcagataaggccgtca
tgcggtcgctgtaaggactcttcctgcttccaggagaacaaacagctctccttgctagtt
cagtgctacaggaagctctgcctctatgtaactcattcgccattgctgcagttggtcagc
agccatgtgggaggatctccagaggtaatggccttgctagaggaggtgctgatgtcacat
gaagaggaaatggagacagaggacccgagtctagtgcaggaagatgtgaatccctctgcc
cctgagtcacttacccccacagaggcaccacctgttcctgcagagctctcagctgtgccc
cagagctcatcctctggccctccatgttccaatggaccgcaggaatgcaatggagaagtg
cttgaagatctggatccctcttctcctgagctggaagtatgtgagctggtagaggagcag
ccacaggcaggcctgtctgtttccagtactggttgtggtggtctggaactgagtctgacc
actggacctttagccccaactccaggcactgtgtgctcactcagggatggggaatctagc
agcagggagctggaggagggggaggttttgctcctaagtgtggaggaggtgttacagact
ttggatccccttcagcccagtcgagattctccacacacacatccagacaggacgcattct
catacacacatagccacggacagagcacacgctcaaatgtacatacagctggatgcagct
cataactacacacaaattcaaacagacaggactaacacagtggcaagccatggtgctcat
atacacacatcctccttcgatcctcctccgacctccaagcccccgccagtccgccttaac
cgtaaacgatctcattcagagagtgatagggaaaaggtgaaacccctccctatcacctcc
atcctacagggctcatcctcacatgttcacactccaaacccctctcatacactgcacaca
caaccacccacgccctccttaactgtaccagcgcacacatactcatccctccccaacggg
gcgcctcctaagcccagccgccctgctcccaaccacagtaaaggtgccaggaagcatgtg
gacccaggccctaagaagccgcacactaaggcccgtagtggtggaggctcaaagaccaag
gaccgaagcaaagaccagcggttgatgtcaggctgcctggtgcccccagcacctgtaagg
cctccatataagaagccagtggagaagaagggctgcaagtgtggcagggccacccagaat
ccctctgtactgacctgcagggggcaacgctgcccctgttattcaaaccgcaaggcgtgc
ttggattgtatctgtcgaggttgccagaactcctacatggccaacggtgagaagaagctc
gaggccttcgccgtgccagagaaagccttggaacagacgcggctcacgctcggcatcaac
ctcaccagcatcacggcggccgcggcgctccgcaacccggcaaccaccagcatccgagca
aacaccctcctcaacgtggccacaggcaacgggacccccgtgaccacagccttcctgtcc
cccagtcccccgcaagagcccaactacgaggacagcctggagctgctgattggttga
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