Lates calcarifer (barramundi perch): 108875398
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Entry
108875398 CDS
T04895
Symbol
b4galnt4a
Name
(RefSeq) N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1
KO
K09657
beta-1,4-N-acetylgalactosaminyltransferase 4 [EC:
2.4.1.244
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00513
Various types of N-glycan biosynthesis
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
108875398 (b4galnt4a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108875398 (b4galnt4a)
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.244 N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase
108875398 (b4galnt4a)
Glycosyltransferases [BR:
lcf01003
]
Glycan extension
Wide specificity
108875398 (b4galnt4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
PA14
OAR
Motif
Other DBs
NCBI-GeneID:
108875398
NCBI-ProteinID:
XP_018519828
UniProt:
A0AAJ7PDX5
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All DBs
Position
LG10:complement(17841298..17964883)
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AA seq
1275 aa
AA seq
DB search
MLRFPVKKIRKQFKLLLLLVLLTSAVWFTYLHINQGKTIKLHFNYGKDGERQTEGTDASR
KRDTRSSAGHHKSEDTSDSREDEAADDEPITGGADGRDHTHIRKFLSQHHKKLPWKLEYK
GQANLHVFEDWCGSSIAQLRKNLHFPLYPHTRITVKKLAVAPKWKNYGLRIFGFLHPYRD
GDFQFSVSSDDNSELWLSPDESPLNARLLVYVGQLGTEWTAPGEFSKFRSQSSKSVHLIS
SRRYYFEILHKQDDKGSDHVEVGWRPFLPGLKYEVIDSAYISLYTDESSLKMNSVDHIPQ
TLASHIRLPEESQPQGVEGGGITQHGADMLKPDPRDTFYSTPMIDPSRLENILPACLYSP
TYVVKDFPIARYQGLQFVYLSFVYPNDFTRLTHMERENKCFYRESPIYLEKFGFYKYMKM
DEEEDDRPFFFPNPDDFLEEEEVVEAEDEAEIVGTQSPKKPSHPSQTSHTSNPSHQHSKP
GPTPAGREGEEEEEDPDEEEEGAVNSIIRRRERRHFPHRDGQMERDLDRDWGRDHTKGDM
RQDSRKGLAEPQQRVLEPDTDSVVRGRSLSWIHTGPVEQGPGRKGGGTGGGGGETPPKLS
KSSLLFPQKSSLSALASRAKQILSNSAHSNNPYDSNNNNKLAGKKKEENKIYITRPRPAK
EREREREQRRERREERASRHPREVFPGVFLYQNGKTTRLVNLGAKGHAGGGVTGGRNLVS
APQLWPNPPTKEGKMSPHNGSINVQSENVQKSVGRAAVAKQPEKSKRKGEHWDLKTTVTA
DLLSKEGPLTPLSHHQDPPLPPVTLPRLNSTENMIQGQSKVTSYLRISEITESQQQPDPD
PNPAEFDQDVNRSNPDPDPEPEPEEGEMSDYSYEEVEARPGWAEESINWQRTFSVNSMDF
ELLRSDWNDLRCNVSGNLQLAESEVVDVLAQYMEKLNERNGGIYTLLRIINVEKRRDSAR
GNRYLVELELMERGRSVVRLSEYIYLLLHRGRQGEESLENTDSAPASAPASAPSPAVSSL
ATPPPPPSTKTPARPGATPWSTAYAKPLLCQPVMLQWRRDVMVHFVVPVKNQARWVQQFI
SDMENLHRQTKDDNFSIIIVDFESEDMDVEQALRESSVPRYEYLRREGNFERSAGLQIGV
DTIEDSHSIVFLCDLHIHFPLNILESIRKHCVEGRLAFAPIVMRLSCGSSPQEPDGYWEV
NGFGLFGIYKSDFDKIGGMNTEEFKDRWGGEDWELLDRVLQNGLEVERLRLRNFFHYYHS
KRGMWNAQNKKTPKG
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcttccccgtgaagaagatccggaagcagttcaagctcctgcttctgctggta
ctgctcacctccgccgtgtggttcacctacctgcacatcaaccagggcaagaccatcaaa
ctccacttcaactacggaaaagatggagagagacagacggaggggacggacgccagccgt
aagagggacactcgctcctcagccggccaccacaagagtgaggacaccagcgacagcagg
gaggacgaggcggcagatgacgagccaatcacaggaggggccgatggcagagaccacacc
cacattcggaagttcctcagccaacaccacaagaaattgccatggaaactagagtataag
ggtcaggccaaccttcatgtgtttgaggactggtgtggctcctccatagcccaactcaga
aagaacctgcacttccctctctaccctcatacgagaatcacagtgaagaagctggcagtg
gctccgaagtggaagaactatggcctgagaatatttggcttccttcacccttacagagat
ggtgatttccagttctctgtatcatctgatgataactctgagctctggctgagtcctgat
gaaagccctctcaacgccagactgctggtctatgtaggacagctgggtacagagtggacc
gctccaggcgagttcagcaagttcaggtcccagtcctccaagtctgtgcacctgatctca
tccagacgatactactttgagatcctccacaagcaggatgacaagggctcggatcatgtg
gaggttgggtggcgtccattcctccctggtctgaaatatgaagtgatagactcggcctac
atctccctctacacagatgagtccagtctgaagatgaacagcgtggaccacatcccccag
accttggccagtcacatccgtctcccggaggagtctcagccccagggtgtggagggaggc
ggcatcacgcagcacggagcggatatgctgaagccggaccccagggacaccttctacagc
actccaatgatcgacccctcccgcctggagaacattctgccggcctgtctctactccccg
acctacgtggtcaaagatttccccatcgccagataccagggccttcagtttgtttatctg
tccttcgtctaccccaatgacttcacacgtctcacccacatggagcgagagaacaaatgt
ttttacagagagtctcctatctacttggagaagtttggtttctacaaatatatgaagatg
gatgaggaggaagatgacagaccgttcttcttccccaatccagatgatttcctagaggaa
gaggaggtggtagaggcagaggacgaggcagagattgttggcacacagtcgcccaagaag
ccctctcatcccagccagaccagccacacctccaacccctcccatcagcactcaaagcct
gggcccacaccagctggcagagaaggggaggaagaggaggaggaccctgatgaagaggag
gagggagcagtcaacagtatcatacgccgcagagagaggagacactttcctcacagagat
ggacagatggagagggatctagacagagactggggacgagatcatacaaagggagacatg
agacaggactccagaaagggacttgccgagccccagcaaagggtgcttgagcccgatact
gacagtgtggtccggggccgttcactgtcctggatccacaccggtcctgtagagcagggc
cctggcaggaaaggaggaggaacaggtggaggaggaggagagactccgcctaaactgagc
aagtcttcacttcttttcccccaaaagtcctccctgtctgccctcgccagccgcgccaag
cagatcctcagcaactccgcccacagcaacaacccttacgacagcaacaacaacaacaag
ctggctgggaagaagaaggaggagaacaagatctacatcaccaggcctcgacccgccaag
gagagggagagggagagggagcagcgtcgagagaggagggaggagagggcgtctcgccac
ccgagagaggtgttcccaggagtgtttttgtaccaaaatgggaagaccacaaggctggtc
aacctgggtgccaaaggacatgcagggggaggggtgacaggaggtaggaaccttgttagt
gcccctcagctctggcccaacccccccacaaaagagggtaagatgtcacctcacaacggg
agcatcaacgtacagagcgaaaatgttcagaagtctgtcgggagagcagcagtggcaaaa
caaccagagaaaagcaagagaaaaggggagcactgggatttaaagacaactgtcacagct
gatctactcagcaaagagggtccactaaccccactgtcccatcaccaagatccccctctc
cccccagtcaccctgccaaggttaaactctacagaaaacatgatccaaggccagtcgaag
gtcacctcttacctcaggatctcagagatcacagagtcccagcagcagccagacccagac
cccaacccggcagaattcgaccaggatgtcaaccgctctaatcctgaccctgaccctgag
ccagaaccggaggagggcgagatgtcggactacagctacgaggaggtggaggctcggccg
ggctgggcggaggagagcatcaactggcagagaaccttctctgtcaactcaatggacttt
gagctcctgcgctccgactggaacgacctgcgctgcaacgtgtctggcaacctccagctg
gcggagagcgaggtggtggacgtgctggctcagtacatggagaaactaaacgagcgcaac
ggagggatctacaccctgctgcgaatcatcaacgtggagaagcggcgtgactcggcgagg
gggaaccgctacctggtagagctggagttgatggagaggggccgcagcgtggtgcgtctg
tcggaatatatttacctgttgctccaccgcggcagacaaggggaggagagcctggagaac
actgactctgccccggcctctgcgccggcatcggccccctcccccgccgtgtccagcctc
gccaccccgccgccccctccctccacaaagacgcccgcccggcccggagcgacgccgtgg
agcaccgcctatgccaagcccctgctctgccagccggtcatgctgcagtggaggagagat
gtcatggtgcactttgtggtgccagtgaaaaaccaagctcggtgggtacagcagttcatc
tctgacatggagaatcttcaccgccagaccaaggatgacaatttcagcatcatcattgtc
gactttgagagtgaagacatggatgtggagcaggcacttagagaaagcagtgtgccaaga
tacgagtatctaaggagagaggggaactttgagcgctcagcaggactgcagatcggagtg
gacactatcgaggatagtcacagcatcgtgttcctgtgtgatctgcacatccacttcccg
ctcaacatcttggaaagtatcaggaagcactgtgtcgagggacgcctcgcttttgctccc
attgtcatgagactcagctgcggcagttcaccacaggagcctgatggttactgggaggta
aatggctttggtctgttcggaatctacaagtcagattttgataagattggagggatgaac
acagaggaattcaaagacagatggggtggagaggactgggagctgctggacagggtgctg
cagaatggtttggaggttgagagactacgcttgaggaacttctttcactactaccactcc
aaacggggcatgtggaacgctcaaaacaagaaaactcccaagggatag
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