Lates calcarifer (barramundi perch): 108875402
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Entry
108875402 CDS
T04895
Symbol
ogdha
Name
(RefSeq) oxoglutarate (alpha-ketoglutarate) dehydrogenase a (lipoamide) isoform X2
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00020
Citrate cycle (TCA cycle)
lcf00785
Lipoic acid metabolism
lcf01100
Metabolic pathways
lcf01200
Carbon metabolism
lcf01210
2-Oxocarboxylic acid metabolism
Module
lcf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lcf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
108875402 (ogdha)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
108875402 (ogdha)
Enzymes [BR:
lcf01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
108875402 (ogdha)
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-GeneID:
108875402
NCBI-ProteinID:
XP_018519836
UniProt:
A0A4W6E2F6
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Position
LG13:27118772..27148960
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AA seq
1043 aa
AA seq
DB search
MHRLRTCAARLRPLTASQAAQTVGQQRPITVASPGGTRTFQPIRCYSAPVASEPFLNGTS
SNYVEEMYYAWLENPKSVHKSWDVFFRNANAGAPPGAAYQSPLGLSAASGLVAPQLSSLV
GAQPNVEKLVEDHLAVQSLIRAYQIRGHHVAQLDPLGIMDADLDSCVPTDIITSSDKLDV
AVFKERLRILTVGGFYGLDETDLDKVFRLPTTTFIGGSESALPLKEIIRRLEMAYCQHIG
VEFMFINDLEQCQWIRQKFETPGVMQFTLEEKRTLLARMVRSTRFEEFLQKKWSAEKRFG
LEGCESLIPALKTIIDKSSENGVENVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEA
ADEGSGDVKYHLGMYHRRINRVTDRNITLSLVANPSHLEAVDPVVQGKTKAEQFYCGDND
GNRVMSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSP
YPTDVARVVNAPIFHVNADDPEAVIYVCKVAAEWRATFHKDVVVDLVCYRRMGHNEMDEP
MFTQPLMYKQIKKQKPVLQKYAEKLIAEGAVSRQEYEEEIAKYDKICEEAYARSKDEKIL
HIKHWLDSPWPGFFTLDGQPKSMSCPSTGLTEENLNHIGQIASTVPVEDFTIHGGLSRIL
KGRAEMIRNRTVDWALGEYMAFGSLLKEGIHIRLSGQDVERGTFSHRHHVLHDQNVDKRI
CIPMNHLSPDQAPYTVCNSSLSEYGVLGFELGFAMASPNALILWEAQFGDFHNTAQCIID
QFICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDPDVMPNITEDFAVR
QLYDCNWIVVNCSSPGNYFHVLRRQILLPFRKPLIIFTPKSLLRHPEARASFDEMLPGTH
FQRLIPEGGSAVERPEEVKRLIFCTGKVYYELTKERKNRGMEGSVAIARIEQLSPFPFDQ
VKAESERFSNADLVWCQEEHKNQGYYDYVKPRIRTTIQRAKPVWYAGREPAAAPATGNKN
THLMELRRFLDTAFDLDAFKDQE
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgtttaaggacttgtgcggcgcggttgcgcccactaaccgcctcgcaggcggct
cagactgttggccagcagcggccaatcacagtcgcctccccgggcggcacaaggacgttt
cagccaatcaggtgctattcggcacctgtggcctctgagccgttcctgaacgggacgagc
tccaactacgtggaggagatgtactacgcctggctggagaaccccaagagtgttcacaag
tcgtgggatgtgtttttccggaacgctaacgccggtgctcctcctggcgccgcctaccag
tctcccctgggtctgtcggcggcgtccggcctcgtcgcccctcagctctcctctctggtc
ggagctcagcccaacgtggagaagctggtggaggaccacctggccgtccagtccctcatc
agggcctaccagatccgagggcaccatgtggcccagttggaccccctcggcatcatggac
gccgatctggactcgtgtgtccccactgacattatcacctcctccgacaagctggacgtg
gctgttttcaaggagaggctgagaatcctaacggtaggaggcttctacggtctggacgag
actgacctggacaaggtgttccgtctgccgaccaccaccttcatcggaggctcggagagc
gctcttcctctgaaggagatcatccgccgactggagatggcgtactgtcagcacatcgga
gtggagttcatgttcatcaacgacctggagcagtgtcagtggatcagacagaagttcgag
actccgggagtgatgcagttcaccctggaggagaagaggactctgctggcccgtatggtc
cgatccaccaggtttgaggagttcctgcagaagaagtggtctgcagagaagcgcttcggt
ctggagggatgtgagtctctgatccctgctctgaaaaccatcatcgataaatcctctgag
aacggagtcgagaacgtcatcatgggaatgcctcacaggggtcgtctgaatgttttggcc
aacgtgatccgtaaagaactggagcagattttctgtcagttcgactccaaactggaagct
gctgatgagggctctggagacgtgaagtaccacctgggtatgtaccatcgtcgtatcaac
cgtgtgacagacaggaacatcaccctgtctctggtggccaacccgtctcacctggaggcc
gtcgaccctgtggtccaggggaagaccaaggctgagcagttctactgcggagacaacgac
gggaacagggtgatgtccatcctgcttcacggagacgcagcgtttgcaggtcagggtatc
gtctacgaaaccttccacctgtctgacctgccgtcctacaccacgcacggcaccgtgcac
gtcgtcgtcaacaaccagatcggtttcaccacagatcctcgtatggctcgatcgtctcca
tacccgactgacgtggctcgagtcgtcaacgctcccatcttccacgtcaacgctgacgac
cctgaggccgtcatctacgtctgcaaggtggccgccgagtggagggccacgttccataag
gacgtggtggtcgacctggtgtgttaccgtcggatgggtcacaacgagatggacgagccg
atgttcactcagccgttgatgtacaaacagatcaagaagcagaagccggttctgcagaaa
tacgccgagaagctgatcgcagagggagcagtgagccgacaggagtacgaggaggaaatc
gccaagtacgataagatctgcgaggaggcgtacgctcgctccaaagatgagaagatcctc
cacatcaagcactggctggactccccttggcccggctttttcactctggacggacagcct
aaatccatgagctgcccctctaccggtctgactgaagaaaacctgaaccacatcggacag
attgcttcaaccgtccctgtggaggacttcaccatccacggaggtctgagtcgtatcctg
aagggtcgagccgagatgattcgtaaccggacggtggactgggctctgggagagtacatg
gcctttggatcgctgctgaaagaagggatccacatcagactgtcgggtcaggacgtagag
cgaggtaccttcagccaccgtcaccacgtcctccacgaccagaacgtggacaagaggatc
tgcattcccatgaaccacctctctcctgaccaggcgccgtacaccgtctgcaacagctcg
ctgtccgagtacggagtcctcggtttcgagttgggctttgcgatggcgagtccaaacgct
ctgatcctgtgggaggctcagttcggagatttccacaacacggctcagtgcatcatcgac
cagttcatctgccccggtcaggccaagtgggtcagacagaacggcatcgtgctgctgctg
ccgcacggcatggaaggcatgggtccagaacattcttcagctcgtccagaaagattcctc
cagatgtgcaacgacgacccagatgtcatgcctaacatcaccgaggacttcgcggtccgt
cagctctacgactgtaactggatcgtggtgaactgctcctctcctggaaactacttccac
gtcctcagacgacagatcctcctgccgttcaggaagccgttgatcatcttcactcccaaa
tctctgctgcgccacccagaggccagagccagcttcgacgagatgctgcctggaactcac
ttccagaggttgatcccagaaggaggctcggcggtggagcgtccagaggaggtgaagagg
ctgatcttctgcacagggaaggtttactatgagctgaccaaagagaggaagaacagaggg
atggagggaagtgtggccatcgcacgtatagagcagttgtctccgttcccgttcgaccag
gtgaaggcggagtcggagcgtttctccaacgccgacctggtctggtgtcaggaggagcac
aagaaccagggttactacgactacgtgaagcctcgcatcaggaccaccatccagagagcc
aagcctgtctggtacgccggtcgagagccggcggccgctccggcgacagggaacaaaaac
actcacctgatggagctgcggcgtttcctggacaccgccttcgacctggacgcattcaag
gaccaggagtaa
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