Lates calcarifer (barramundi perch): 108875474
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Entry
108875474 CDS
T04895
Name
(RefSeq) 3-hydroxyacyl-CoA dehydrogenase type-2
KO
K08683
3-hydroxyacyl-CoA dehydrogenase / 3-hydroxy-2-methylbutyryl-CoA dehydrogenase [EC:
1.1.1.35
1.1.1.178
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00280
Valine, leucine and isoleucine degradation
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
108875474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108875474
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108875474
Enzymes [BR:
lcf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
108875474
1.1.1.178 3-hydroxy-2-methylbutyryl-CoA dehydrogenase
108875474
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial ribonuclease P
108875474
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
108875474
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
adh_short
adh_short_C2
KR
Epimerase
3Beta_HSD
Motif
Other DBs
NCBI-GeneID:
108875474
NCBI-ProteinID:
XP_018519960
UniProt:
A0A4W6FBM2
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All DBs
Position
LG6:24707611..24712137
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AA seq
260 aa
AA seq
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MANIRCVKGMVGLVSGGASGLGRATVERLVQSGASAVILDLPSSDGQALAESLGERCAFA
PADVTSEADVQSAVSLAKEKFGKLDLAVNCAGIAVAVKTYNFKKDLPHSLEDFQRVINVN
IAGTFNVIRLAVGEMGKNEPDADGHRGCIINTASVAAFDGQVGQAAYSASKGGIVGMTLP
IARDLAPMGIRVITIAPGLFSTPLLAGLPEKVRSFLARQVPFPPRLGDPAEFAHLVTSLA
ENPMINGEVIRLDGAIRMQP
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacattcggtgtgtcaagggtatggttggcctggtgtcgggcggtgcctctggt
ttgggccgggccaccgtggagcgtctggtgcagagcggagcgtctgccgtgatcctggac
ctgccctcctccgatggacaagctctggccgaaagtctgggagaacgctgtgccttcgct
cctgcagacgttacatcagaagcagacgtgcagtcagctgtttccctcgccaaggagaag
tttgggaagctggacctggccgttaactgtgccggcatcgccgtggccgtcaagacctac
aactttaaaaaggatcttcctcacagcctggaggacttccagcgtgttatcaacgtgaac
attgcaggaacctttaatgtgattcgtcttgctgtgggtgagatggggaagaacgagccg
gacgcagacggacacagaggatgtatcattaacactgccagcgtggcagcctttgatgga
caggtcggccaagcagcttattcagcttctaaaggtggtattgttggaatgacgctcccc
atcgcacgagacctggcgcccatgggcatcagagtcatcaccatagcacctggtctcttc
tccactcctctcctggccggtcttccagagaaggtgcgctcttttctcgctcgccaggtg
cccttccccccgcgcctgggagaccccgccgagtttgcccacctggtgacatcactggcc
gagaaccccatgattaatggagaagtcattcgactggacggagccattcgcatgcagccc
tga
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