Lates calcarifer (barramundi perch): 108876896
Help
Entry
108876896 CDS
T04895
Symbol
acta1b
Name
(RefSeq) actin alpha 1, skeletal muscle b
KO
K12314
actin, alpha cardiac muscle
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04260
Cardiac muscle contraction
lcf04261
Adrenergic signaling in cardiomyocytes
lcf04814
Motor proteins
lcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108876896 (acta1b)
04820 Cytoskeleton in muscle cells
108876896 (acta1b)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
108876896 (acta1b)
04261 Adrenergic signaling in cardiomyocytes
108876896 (acta1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108876896 (acta1b)
04147 Exosome [BR:
lcf04147
]
108876896 (acta1b)
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
108876896 (acta1b)
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108876896 (acta1b)
Exosomal proteins of bladder cancer cells
108876896 (acta1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
108876896
NCBI-ProteinID:
XP_018522209
UniProt:
A0A4W6G0X0
LinkDB
All DBs
Position
LG2:complement(26518769..26522833)
Genome browser
AA seq
377 aa
AA seq
DB search
MCDDDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK
MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDAGDGVTHNVPVYEGYALPHAIMRL
DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETAYNSIMKCDIDIRKDLYANNV
LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
KQEYDEAGPSIVHRKCF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacgacgatgagactaccgcccttgtgtgcgacaacggctccggcctggtgaag
gctggcttcgccggagacgatgcccccagggccgtgttcccctccatcgtcggccgcccc
cgtcaccagggtgtcatggtcggtatgggtcagaaggactcctacgtcggcgacgaggcc
cagagcaagaggggtatcctgactctgaagtaccccattgagcacggtatcatcaccaac
tgggacgacatggagaagatctggcaccacaccttctacaacgagctgagagttgccccc
gaggagcaccccaccctgctcactgaggcccccctgaaccccaaggccaacagagagaag
atgacccagatcatgtttgagaccttcaacgtcccagccatgtatgtggccatccaggct
gtgctgtccctgtacgcctccggccgtaccactggtattgtgctggatgctggtgatggt
gtgacccacaacgtcccagtctatgagggttacgccctgccccacgccatcatgcgtctg
gacctggctggtcgcgatctgaccgactacctgatgaagatcctgactgagcgtggctac
tccttcgtgaccaccgccgagcgtgagatcgtgcgcgacatcaaggagaagctgtgctat
gtggctctggacttcgagaacgagatggccaccgctgcctcctcctcctccctggagaag
agctacgagcttcccgacggtcaggtcatcaccatcggtaacgagaggttccgttgcccc
gagaccctcttccagccttccttcatcggtatggagtctgctggcatccacgagactgcc
tacaacagcatcatgaagtgcgacattgacatccgtaaggatctgtacgccaacaatgtg
ctctccggtggtaccaccatgtaccctggtattgctgaccgtatgcagaaggagatcact
gctctggcccccagcaccatgaagatcaagatcattgctcctcccgagaggaagtactcc
gtctggatcggtggctccatcctggcttccctgtccaccttccagcagatgtggatctcc
aagcaggagtacgacgaggccggccccagcattgtccacaggaagtgcttctaa
DBGET
integrated database retrieval system