KEGG   Lates calcarifer (barramundi perch): 108876896
Entry
108876896         CDS       T04895                                 
Symbol
acta1b
Name
(RefSeq) actin alpha 1, skeletal muscle b
  KO
K12314  actin, alpha cardiac muscle
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04260  Cardiac muscle contraction
lcf04261  Adrenergic signaling in cardiomyocytes
lcf04814  Motor proteins
lcf04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    108876896 (acta1b)
   04820 Cytoskeleton in muscle cells
    108876896 (acta1b)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    108876896 (acta1b)
   04261 Adrenergic signaling in cardiomyocytes
    108876896 (acta1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lcf04812]
    108876896 (acta1b)
   04147 Exosome [BR:lcf04147]
    108876896 (acta1b)
Cytoskeleton proteins [BR:lcf04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     108876896 (acta1b)
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   108876896 (acta1b)
  Exosomal proteins of bladder cancer cells
   108876896 (acta1b)
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 108876896
NCBI-ProteinID: XP_018522209
UniProt: A0A4W6G0X0
LinkDB
Position
LG2:complement(26518769..26522833)
AA seq 377 aa
MCDDDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK
MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDAGDGVTHNVPVYEGYALPHAIMRL
DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETAYNSIMKCDIDIRKDLYANNV
LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
KQEYDEAGPSIVHRKCF
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgtgtgacgacgatgagactaccgcccttgtgtgcgacaacggctccggcctggtgaag
gctggcttcgccggagacgatgcccccagggccgtgttcccctccatcgtcggccgcccc
cgtcaccagggtgtcatggtcggtatgggtcagaaggactcctacgtcggcgacgaggcc
cagagcaagaggggtatcctgactctgaagtaccccattgagcacggtatcatcaccaac
tgggacgacatggagaagatctggcaccacaccttctacaacgagctgagagttgccccc
gaggagcaccccaccctgctcactgaggcccccctgaaccccaaggccaacagagagaag
atgacccagatcatgtttgagaccttcaacgtcccagccatgtatgtggccatccaggct
gtgctgtccctgtacgcctccggccgtaccactggtattgtgctggatgctggtgatggt
gtgacccacaacgtcccagtctatgagggttacgccctgccccacgccatcatgcgtctg
gacctggctggtcgcgatctgaccgactacctgatgaagatcctgactgagcgtggctac
tccttcgtgaccaccgccgagcgtgagatcgtgcgcgacatcaaggagaagctgtgctat
gtggctctggacttcgagaacgagatggccaccgctgcctcctcctcctccctggagaag
agctacgagcttcccgacggtcaggtcatcaccatcggtaacgagaggttccgttgcccc
gagaccctcttccagccttccttcatcggtatggagtctgctggcatccacgagactgcc
tacaacagcatcatgaagtgcgacattgacatccgtaaggatctgtacgccaacaatgtg
ctctccggtggtaccaccatgtaccctggtattgctgaccgtatgcagaaggagatcact
gctctggcccccagcaccatgaagatcaagatcattgctcctcccgagaggaagtactcc
gtctggatcggtggctccatcctggcttccctgtccaccttccagcagatgtggatctcc
aagcaggagtacgacgaggccggccccagcattgtccacaggaagtgcttctaa

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