KEGG   Lates calcarifer (barramundi perch): 108877881
Entry
108877881         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: beta-1,4-galactosyltransferase 3
  KO
K07968  beta-1,4-galactosyltransferase 3 [EC:2.4.1.90 2.4.1.38 2.4.1.-]
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf00510  N-Glycan biosynthesis
lcf00513  Various types of N-glycan biosynthesis
lcf00514  Other types of O-glycan biosynthesis
lcf00515  Mannose type O-glycan biosynthesis
lcf00533  Glycosaminoglycan biosynthesis - keratan sulfate
lcf00601  Glycosphingolipid biosynthesis - lacto and neolacto series
lcf01100  Metabolic pathways
Module
lcf_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
lcf_M00075  N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    108877881
   00513 Various types of N-glycan biosynthesis
    108877881
   00515 Mannose type O-glycan biosynthesis
    108877881
   00514 Other types of O-glycan biosynthesis
    108877881
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    108877881
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    108877881
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:lcf01003]
    108877881
Enzymes [BR:lcf01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     108877881
    2.4.1.90  N-acetyllactosamine synthase
     108877881
Glycosyltransferases [BR:lcf01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   108877881
  Glycolipid
   108877881
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C
Other DBs
NCBI-GeneID: 108877881
NCBI-ProteinID: XP_018523616
UniProt: A0AAJ7LHJ1
LinkDB
Position
LG6:15145173..15154751
AA seq 432 aa
MACYGRSLDSPCTLALLVGFQFAFVLYFSLGGFRGLVSVLVHTTEPEFDYSRPHDVYTNL
SHLGVPPPPPRNSGTGPPATGPPLRDCQIPSPLLVGPVSVHLSSPLSLEEIRQRNPLVLP
GGRYRPPDCEPRHHTAIVVPYRNRQTHLRALLYHLHPFLQRQQIHYSIYIVQQWGNGTFN
RAKLLNVGVREALRDEDWSCIFLHDVDLLPENDHNTYTCHKQFPTHLSVAMDKFRYRLPY
PQYFGGVSAVTPDQYMKMNGFPNQYWGWGGEDDDIAARVRLSGMKIVRPPVAIGHYKMIK
HKGDRGNEQNPRRFDLLKRTRLNWRSDGLNSLTYELLSKELEPLYTNLTVNIGEDPHLPQ
GKVPIPVKTTTPVHQRSTSKTEGTAKQEKERQQSKASVVANMIVAKPVGEKTEAAQSKTA
NQTTQEKNGVMK
NT seq 1299 nt   +upstreamnt  +downstreamnt
atggcgtgctacgggaggtctctggactccccctgcacgctagccttgctggtgggattc
cagtttgcctttgttctctatttctccctcggggggttcagaggcttggtgtctgtcctg
gttcacaccacagagccggagtttgactactctcgacctcatgacgtctacaccaaccta
agtcatctgggagtaccgcctccccctcctcgcaactctggcactggtccccctgccaca
ggaccaccactgagagattgccagatcccctccccactgctggttggacctgtgtctgtc
catctttcctctcctctgtctctggaggagatccgacagaggaatccgttagtgctgcca
ggtggacgctaccggccaccggactgtgaacctcgccaccacacggctatagtggtgcca
taccggaaccgacagacccacctccgtgccctgctctaccacctccacccattcctgcag
agacagcagatccactacagcatctacatagtgcagcagtgggggaatggtacttttaac
cgagccaagctgctcaacgtcggggtacgggaggcccttagagacgaagactggagctgc
atcttcctgcatgatgttgacctgctgccggagaacgaccacaacacctacacctgccac
aaacagttccccacacacctgtctgtggccatggacaagttcagatacaggctgccgtac
ccacagtattttggtggggtgtctgcggtgaccccagaccagtacatgaagatgaatggg
ttccccaatcagtactggggctggggcggagaggatgacgacattgctgccagagtacga
ctatctggcatgaagattgtgcgccccccagtggccattggtcattacaagatgatcaag
cataaaggagacagaggcaatgagcaaaatccacgcaggtttgaccttctgaaaaggacc
agactcaactggcgttctgatggcctcaactctctgacctacgagctcctttccaaagaa
ctggagccgctctacaccaaccttactgtcaacatcggagaagacccccatctgccccag
gggaaagtacccatccctgtgaaaacgacaacccctgtccaccaacgtagcaccagcaag
accgagggcactgccaaacaggagaaggagcgacaacagagcaaagcgtctgttgtggca
aatatgattgtggccaagccggttggtgaaaagacagaagctgcgcagtcaaaaacagca
aatcaaacaacacaggagaagaacggtgtgatgaaatag

DBGET integrated database retrieval system