Lates calcarifer (barramundi perch): 108877896
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Entry
108877896 CDS
T04895
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 isoform X1
KO
K01116
phosphatidylinositol phospholipase C, gamma-1 [EC:
3.1.4.11
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00562
Inositol phosphate metabolism
lcf01100
Metabolic pathways
lcf04012
ErbB signaling pathway
lcf04020
Calcium signaling pathway
lcf04070
Phosphatidylinositol signaling system
lcf04370
VEGF signaling pathway
Module
lcf_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
108877896
09130 Environmental Information Processing
09132 Signal transduction
04012 ErbB signaling pathway
108877896
04370 VEGF signaling pathway
108877896
04020 Calcium signaling pathway
108877896
04070 Phosphatidylinositol signaling system
108877896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108877896
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
108877896
Membrane trafficking [BR:
lcf04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
108877896
Endocytosis
Macropinocytosis
Phospholipase C
108877896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
SH2
PI-PLC-Y
EF-hand_PLCG2
PH
SH3_1
C2
EF-hand_PLCG1
SH3_9
PH_12
SH3_2
EF-hand_7
EF-hand_6
GDPD
Mcp5_PH
Motif
Other DBs
NCBI-GeneID:
108877896
NCBI-ProteinID:
XP_018523636
UniProt:
A0AAJ7PH02
LinkDB
All DBs
Position
LG6:16015975..16042799
Genome browser
AA seq
1315 aa
AA seq
DB search
MAGTSGFFSNGPVPWMDNDTEMNNLYRDLELGTVLTLFYSKKSQRPERRTFQVKLETRTI
IWTRGTDKIEGEIDIREIKEIRPGQKSRDFERYVEDSAARTDQAHCFVILYGTEFRLKSL
SLAATSDEEMTMWVKGLTWLVADTLKSPTPLQIERWLRKQFYAVDRNREDRISCKDLKNM
LSQVNYRVPNMRFLREKLPDSELRNGDVSYSQFAQLYRSLMFDAQKNMEIPFLQRFTDRP
EQRISLEDFKSFLLEAQKEMWATDNNKVQEFMFGYLKDPLREVEQPYFYQEEFLTYLFSK
ENTIWDSSLDQVCPENMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIE
LDCWDGPEGMPVIYHGHTLTTKIKFCDVLATIKEHAFVTSEYPIILSIEDHCSIVQQRNM
ATHFKKVFGEMLLTKAVDIAADGLPSPNQLKRKILIKHKKLAEGSAYEEVSTSTPYSEND
ISNSIKNGILYLEDPINHEWYPHFFVLTSSKIYYSEETSNNQGNDDEEEHREVSNGMDQH
VTEKWFHGKLGAGRDGRQIAERLLSEYCLETGAPDGSFLVRESETFVGDYTLSFWRSGRV
QHCRIHSRQEAGSPKFYLTDNLVFDTLFALITHYQQVALRCNEFEMKLTEPVPQTNAHES
KEWYHANLSRSHAENMLMRVPRDGAFLVRKRAEPNSFAISFRAEGKIKHCRVQQEGQTVV
LGTSEFDSLVDLISYYEKHPLYRKMKLRYPINEDTLEKIGTAEPDYGSLYEGRNPGFYVE
ANQMPTFKCTVRAMYEYKAQRDDELSFTKNAIISNVDKQEGGWWKGDCGGKKQLWFPANY
VEEISPSAAEPDRTQEMTENSPLGDLLRGSVDVSSCQIVVRSDGKGSRPHVFSLVPNASM
RTGPVLEVAASSQDELKEWVFKIREVTMTSEAKLEEGKIMERRKKIALELSELVIYCRPV
PFDEDKIGTERACFRDMSSFPETKAEKYVNKIKGKKFLQYNRLQLSRIYPRGQRLDSSNY
DPLPMWLCGSQLVALNFQTADKPMQMNQALFMLNGKSGYVLQPSIMRDENFDPFDRHTLR
GLEQVTLEIEVLGARHLPKHGRGIVCPLIEIEVCGAEYDSGKQKTDSEADNGLNPTWPRK
PFQFTVCNSAFAFLRFVVYEIDMFSDQNFLAQATFPIHRLKTGYRSVPLKNSYNEDLELA
SLLVHMDIIRGRDENGEVLSPFLAAGATSASASTQAGRERVGDLSSVSSTSSSMSALPQS
PAQAMAYRGREGSFESRYQSPLDDFRVSQETLLDHMDPQNRRVLRRTRVGGENRV
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atggcagggacctcgggcttcttttccaacggacctgttccgtggatggacaacgacaca
gagatgaacaacctgtaccgagacctggagctggggacagtactgacactgttttattca
aagaagtcccagcggccagagaggaggacatttcaagtcaagctggagaccaggactatt
atctggactcggggcacggataaaatagagggagagatcgacattcgagagatcaaggag
atccgacctggacagaagtcccgggactttgagcgctacgtggaggactcagcagcacgg
acggaccaggcgcactgctttgtcatcctgtatggaactgagtttcgccttaaatcactc
agcctggcagcaacatctgatgaggagatgaccatgtgggtgaagggtttaacctggctt
gtggctgacacgctgaagtcaccaacacctcttcagatagagaggtggttacgcaaacag
ttctatgcggttgatcgcaacagagaagacaggatatcctgtaaggatctgaagaacatg
ctgagccaggtcaactacagggtgcccaacatgaggttcctccgagagaaacttccggac
tcagagctgaggaacggagacgtgtcctacagtcagttcgcccagctctatcgcagcctc
atgtttgatgctcagaaaaacatggagatcccctttctacaaaggttcactgacagacca
gaacagaggatctccctagaggacttcaagagcttcctcctggaagctcaaaaggaaatg
tgggctacagacaacaacaaggtgcaggagtttatgttcggctacctgaaagaccccctg
agagaagtggagcagccgtatttctaccaagaggagttcctgacgtatctgttctccaaa
gagaacaccatctgggattcctccctggaccaagtgtgtcctgagaatatgaacaacccc
ctgtcccactactggatctcctcttcgcacaacacctacctgacaggagaccagttttcc
agtgaatcttccctggaggcatatgctcgctgtctgaggatgggctgccgctgtattgaa
ttggactgctgggatggtcctgaaggaatgccagtcatctaccatggacacactctcaca
acaaaaatcaagttctgtgatgtcctggccaccattaaagagcatgccttcgtcacatcc
gagtatcccatcatcctgtccattgaggaccactgtagtattgtgcagcagaggaatatg
gccactcactttaagaaggtgtttggagaaatgcttctgaccaaggcggtggacatcgca
gcagatggtctgccttcacccaaccagctcaagagaaaaattctcatcaagcataagaag
cttgcagaaggcagtgcttacgaggaggtgtccacctccactccctattcagagaatgat
atcagcaactccatcaaaaatggcatcctgtaccttgaagaccccattaaccatgagtgg
taccctcatttctttgtcctgaccagcagtaagatctactactcagaagagacctccaat
aaccagggtaacgacgatgaagaggagcacagagaggtgtccaatggtatggaccagcac
gtgacggagaaatggttccacgggaagctgggcgcagggcgggacgggcggcagatagcc
gagaggctgctgtctgagtactgcctggagactggagctcctgacggctccttcctggtc
cgagagagcgagacctttgtgggagattacacactgtcgttctggcggtcagggcgggtg
cagcactgtcgtatccactcacgtcaggaggccggcagccccaagttctacctgactgac
aacctggtgttcgacacgctctttgccctgatcacccactaccagcaggtggcgctgcgc
tgcaacgagtttgagatgaagctgactgagccagtacctcagaccaatgcccacgaaagc
aaagagtggtaccatgccaacctctccaggagccatgctgaaaacatgttgatgagggtt
cctcgtgacggggctttccttgtcaggaagagggcagaacccaactcgtttgccatttcc
ttcagggctgagggtaaaataaagcactgtcgtgtgcaacaggaaggtcagaccgtggtg
ctgggcacctcagagtttgacagcctagtagatctaatcagctactatgagaagcaccct
ctgtaccgtaaaatgaaactgcgttaccctatcaatgaggacacactggagaagataggc
actgctgagccagactacgggtcactgtatgagggcaggaatccaggattttatgtggag
gccaaccaaatgccaacattcaagtgcacagtcagagccatgtacgagtataaagcccag
agagacgatgagctctccttcaccaagaacgccataatctctaatgtggacaaacaggaa
ggaggatggtggaagggtgactgtggagggaagaagcagctgtggtttcctgctaactac
gtggaggagatcagtccatcagcggcagaacctgatagaactcaggagatgacagagaat
agcccgctgggagatctgctgagaggaagtgtggacgtgtcttcatgtcagattgttgtg
cgttctgatgggaagggcagcaggccccacgtcttctccctggtgccgaatgcctccatg
cgaacaggcccggtgctggaagtcgctgccagcagccaagatgagctcaaggaatgggtg
ttcaagatccgcgaggtcaccatgacctcagaggccaagctggaagaggggaagattatg
gagaggaggaagaagattgcactggaattatctgagctggtcatctactgtaggcctgtg
ccatttgatgaagataagatcggcacagagcgggcctgtttccgggacatgtcatccttc
cctgagaccaaggcagagaagtacgtcaacaagatcaagggaaagaagttccttcagtac
aatcgactacagctgtccaggatctaccccagaggccagagactagactcctctaactac
gacccgctgccgatgtggctctgcggttctcagctggtagctctcaacttccagacagca
gataagcccatgcagatgaaccaagccctgttcatgttgaatggaaagagcggctacgtc
cttcagccatccatcatgagggacgaaaactttgatccgtttgacagacacacactacga
ggccttgaacaagtcactctagagatagaggttttgggcgcccggcatctgcccaagcac
ggacgtggcatagtttgtcctctgattgagatcgaagtgtgtggggcagagtatgacagc
ggcaagcaaaaaacagactcggaagctgataacggcctgaaccccacgtggccccggaag
ccattccagttcacagtgtgcaactctgcatttgccttcctacgctttgtggtttatgaa
attgacatgttcagtgaccaaaatttcttggctcaggccacattccccattcaccgtctc
aagacaggttaccggtcagtacctctgaagaacagctacaacgaggatctggagttggct
tctctgttagtccacatggatatcatcagaggcagggatgaaaacggagaggttctgagc
ccgtttctcgctgccggggccacatcagcgtcggcgtccacccaagcaggacgagaacgt
gtcggggacctgagctcggtgtcttcgacttcgtccagcatgtctgctctgccccagtca
ccggcccaggccatggcctacagggggagagagggctccttcgaatcccgctaccagtcc
cccctggacgacttcagggtgtcccaggagacgctgttggaccacatggacccacagaac
aggagggtgttgcggaggaccagagtgggcggagagaaccgtgtctaa
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