Lates calcarifer (barramundi perch): 108878401
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Entry
108878401 CDS
T04895
Name
(RefSeq) tight junction protein ZO-2 isoform X1
KO
K06098
tight junction protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108878401
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Guanylate_kin
SH3_2
SH3_1
Motif
Other DBs
NCBI-GeneID:
108878401
NCBI-ProteinID:
XP_018524574
UniProt:
A0A4W6FJZ4
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Position
LG13:23125721..23200162
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AA seq
1207 aa
AA seq
DB search
MPVKGGGRLASYPSKSENVGSSGMEEMVWEQYTVTLQRDSKMGFGIAVSGGRDNPNVENG
ETSIIVSDVLQGGPADGLLFENDRVIQVNSIPMDNVPHSFAVQSLRKCGKVAKITVKRPR
KVAVQSLKQPPSPSGDSREYTPPTHYYDADNDNGWYRDEGRDHTSDSKGYLDPEYRGGRD
YNQRGRSRGRSQERISPSPDRSRREGSRDRALDTSTDRQRYHSRGRSPGDSYRMEDKYER
GEGGGGKGGRYRSRDQLNEIPPSPEPSRELEPLEKPVNVMLVKNRPNEEYGLRLGSQIFI
KQMTSTGLAAKDGNLQEGDIILKINGTVTENLSLHDAGKLIEKSRGKLQLVVQRDRRQIL
VRIPPLADSDSDNDDISEMESYHSYSPPEERRSRQSDLSSHSSNERDNPRQEPMRTTKMS
AMASPFRVPEDPHASVDLDKDTPFIEEPPVAATATPKILLRPSPEDEKIYGPNTVMVNFQ
KGDSVGLRLAGGNDVGIFIAGVQEGSPAEEEGLRIGDQILKVNNVDFQGVVREEAVLFLL
EIPKGEVVTILAQSKPDAYNDILVSGRGDSFFIRTHFEYEKETPQSLAFSRGDIFKVVDT
LYDGKLGNWLAIRVGKEKQLLEKGIIPNKSRAEQMASVQSSHKAAVGDRADFWRLRGQRS
VKRKDLRKSRENLSSQTLATRFPAYERVVLREAGFRRPVVLFGPIADAANERLASEMPNL
FVIAKTEPKDAGSEKSSGVVRLNTIRQIIEQDKHALLDVTPKAVDTLNYTQWYPIVIFFN
PDSKHGIKAMRQRIIPSSNRSARKLYEQAIKLRKTCSHLFTATIDLISSNDAWYGSVKDS
IREQQMQAVWVSDGKLEGVESDLDCQDVERLSFLSAMSADYLSMDSRLTSDLDDTADEGG
AYTDNEPDVETVRISAISRSSEPVTAEEILRRYSPDIRGRMRKISSREVLNRSSPPAVSL
PDSKVKLPLRDDRVFVSGSINSHHHPRQHHPPPPSSSQSYDSPSSSSPASSSNDPPPPIP
RSAALSGPPPPPPAHHLNSFSKLHPLGVPQPSTMPTPSSCGSTAQTAAHSPLALPNATIA
ACRQQGEAADDSSVEDPSMKSFLGKIKAFEKMDHFARSQRMLELQEAQNARLEIAQRHPD
IYAVPLKTAKLDHSRPQPIGSSSHSEPLTTPSSKEGCPFYPTKEEAEEGVVPGYYTTNSH
QYQDTEL
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgaaaggcggaggaagactggcctcttacccgagcaagagcgaaaatgtcgga
agctccgggatggaagagatggtctgggagcagtacacagtcactcttcagcgggactct
aagatgggttttggtattgctgtgtcaggtgggcgtgacaaccccaatgtggaaaatggt
gagacgtcaatcattgtgtcagatgtgcttcaaggaggaccagcagatggattactcttt
gagaatgatcgcgtcattcaggtcaactccatcccaatggacaacgtgcctcattccttt
gctgtgcagtcactccgtaaatgtggcaaagtggccaaaataacggtgaagagacctcgt
aaggtagcagttcagtccctgaagcagcccccctccccaagcggagacagccgggaatac
accccccccacccactactatgacgctgacaacgacaatggctggtaccgtgatgaaggt
cgggaccacacctctgacagcaaaggatacctggaccctgagtacaggggagggcgggac
tacaaccagagaggaaggagccgtgggaggagccaggagagaatctcacccagcccagac
agatccaggagggagggtagccgggaccgagccctggacaccagcactgaccgtcagagg
taccacagcagaggacgaagcccaggggacagttaccgtatggaggacaagtatgagcga
ggagaaggaggaggaggaaaaggagggaggtataggagcagggaccagcttaatgaaatc
cctccctccccagaaccctccagagagctggagccactggaaaaacctgtcaacgtcatg
ctggtgaagaacagacccaacgaagagtatggtctacgtctggggagtcagatctttatc
aaacagatgaccagcacaggcctggctgccaaggatgggaacctgcaggagggagacatc
attctcaagattaatgggacagtgacagagaacctctctctgcatgatgctgggaagctg
atagagaaatccagagggaagctgcagctggtggtccagagagaccgccgccagatcctt
gtccgcatccccccccttgcagactctgactctgataatgatgacatatcagagatggag
tcataccattcctattctcctccagaagagagaaggtctcgccaatctgacctgtcttcc
cactcctctaatgaaagagataaccccaggcaagaacccatgaggacaaccaagatgtca
gccatggcctccccattcagagtacctgaagatccccatgcctcagttgatctggacaaa
gacacaccattcatagaggagcctccagttgctgcaacagccacgcccaagattcttctt
cgaccgagtccagaagatgaaaaaatatatgggccaaacacagtgatggtgaatttccag
aagggggacagtgttgggcttaggctggcaggaggtaatgatgttggcatctttattgct
ggtgttcaagagggcagtcctgctgaggaggagggcctgcgcatcggagaccagatctta
aaggtgaacaacgttgattttcaaggtgtagtgagagaggaagctgtgctcttcctgttg
gagattcctaaaggggaggtggtcactatcctggcccagagcaaacctgacgcttataat
gatatcttggtatcgggacgtggagactccttcttcatccggacccactttgagtatgag
aaggagactcctcagagcttggccttcagccggggggacatcttcaaggtggtggacacc
ctgtatgatggcaagcttggcaactggctggcaatccgtgttggcaaggagaagcagctg
ctggagaagggaatcatccccaacaagagcagagcggaacagatggccagtgtccagagc
tcccataaagcagctgtgggcgatcgagctgacttctggcggttgcgaggccagcgttct
gtgaagaggaaggacctgaggaagagcagagaaaacctgagcagtcagaccctggccact
cgctttccagcgtacgaacgagtggtgctccgagaggctggtttccgtcgtcctgtggtt
ctgttcggccccatcgctgacgctgctaatgagagactggcctctgagatgcccaacctg
tttgtcattgccaaaactgaaccaaaagatgctggctctgagaagtcctctggtgtggtt
cgtctgaacaccatccgacaaatcattgagcaggacaagcatgccctgctggatgtgaca
cccaaggcagtggacaccctgaactacacccagtggtaccccattgtcatcttcttcaac
ccagacagcaagcacggcatcaaggccatgagacagaggatcatccccagttccaaccgc
agtgcccgcaaactctatgaacaggccatcaaactgaggaagacctgctctcacttattc
actgccaccattgatctgatctcatccaacgatgcctggtatggcagtgtgaaagattcc
atcagagagcagcagatgcaggctgtctgggtgtctgatggaaagctggagggagtagag
agtgatctggactgccaggatgtggagcgtctgtccttcctgtccgccatgtctgccgac
tatctcagcatggacagccggctgacctccgaccttgatgacaccgctgatgaggggggg
gcctacactgacaatgagcctgatgtggagacagtacgcatctctgccatcagccgctca
tctgaacctgtcacagctgaggagatcttgcgcagatacagtccagacattaggggccgc
atgaggaaaatcagcagccgggaagtgctcaataggtctagccctccggctgtctcctta
ccagacagcaaggtgaaattgcctctgagggatgatcgggtctttgtatcaggctccatc
aactcacaccatcatcctcgccaacaccaccctccacccccaagctccagccaaagttac
gattctccatccagcagcagtcctgccagcagcagcaacgatcctccaccacccatccct
cgttcagctgctttgtctggcccgccgccccctcctccagctcaccatctcaactccttc
agcaaactgcatcctttgggagtaccccaaccctccaccatgcccactcccagcagctgc
gggagcacggcacaaactgcagctcactcacctttggctctgcccaatgcgaccattgca
gcctgtaggcagcagggggaggcagcagatgacagctctgtggaggatccatctatgaag
tccttcttggggaagatcaaagccttcgagaagatggatcattttgcccgatcccaaagg
atgctggaactgcaggaggcacagaatgccaggttggaaatcgctcagaggcacccagac
atctatgctgttccattgaagacagccaagctggatcacagtcgcccacagcctatcggc
tccagctcccattctgaacccctgactactccatcctccaaggagggatgtcccttctac
ccgaccaaagaggaggcagaggagggggtagtaccaggatattataccaccaactcccac
cagtaccaggacaccgaactgtag
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