Lates calcarifer (barramundi perch): 108878469
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Entry
108878469 CDS
T04895
Name
(RefSeq) RING finger and CHY zinc finger domain-containing protein 1
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04115
p53 signaling pathway
lcf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108878469
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
108878469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108878469
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108878469
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108878469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-RING_UBOX
zf-RING_4
zf_Tbcl_2
Motif
Other DBs
NCBI-GeneID:
108878469
NCBI-ProteinID:
XP_018524733
UniProt:
A0AAJ7LIY1
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All DBs
Position
LG13:19603372..19608159
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AA seq
277 aa
AA seq
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MASPAGCEHYVRSCLLKAPCCDKLYVCRLCHDAEENHQMDRFKVREVQCSKCQTVQQAQQ
TCQQCHVQFGEYYCEICHLFDKDKKQYHCQPCGICRIGPKEKYFHCEKCNLCLAQDLRGN
HKCVENVSRQNCPVCMEDIHTSRIGAHVLPCGHLLHKTCFHDMVRKGAYRCPLCMHSAWN
MEDHWDQIDIEIAQSPMPTEYQGATVKIICNDCQAHCTVPFHVLGMKCSGCGSYNTAQDG
GLIQQPQSLQSEQDTENEAETDTEPEQQDQPESPTQH
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccctgccggttgtgagcattatgtccgcagctgcttactgaaagcaccttgc
tgtgataaactgtatgtgtgtcggctgtgccatgatgcagaggaaaaccaccagatggat
cgattcaaagtcagagaagtgcagtgctccaagtgtcaaacagtgcagcaggcacagcag
acttgccagcagtgtcatgtgcagtttggggagtattactgtgagatttgccatttgttt
gacaaggataaaaagcagtaccactgtcagccctgtggaatatgcaggattgggcccaag
gagaagtatttccattgcgagaagtgcaacttatgtttagcccaggatctacggggaaac
cacaagtgtgttgaaaatgtgtcaaggcagaactgcccagtgtgtatggaggatattcac
acatccagaattggagctcatgttcttccatgcggccatcttttacacaagacctgcttt
catgacatggtcagaaagggagcgtatcgctgccctctgtgtatgcactctgcctggaat
atggaggaccattgggatcagatagacatagagattgctcagtcaccaatgcccactgaa
taccagggtgccactgtcaaaattatatgtaatgactgccaagcccactgcacagtgcct
ttccatgtgctgggtatgaagtgcagtggctgtggctcctacaacacagcacaagatggc
ggactgatccagcagcctcaaagtctacagtcagagcaggacactgagaatgaggcagaa
accgacacagagcccgagcagcaagatcaacctgagtcacccacgcaacattag
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