Lates calcarifer (barramundi perch): 108878516
Help
Entry
108878516 CDS
T04895
Name
(RefSeq) ras GTPase-activating protein 1
KO
K04352
Ras GTPase-activating protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108878516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2
RasGAP
PH
C2
SH3_1
SH2_2
SH3_9
PH_11
SH3_2
DUF7656
Motif
Other DBs
NCBI-GeneID:
108878516
NCBI-ProteinID:
XP_018524820
UniProt:
A0AAJ7LJ46
LinkDB
All DBs
Position
LG13:12216127..12241738
Genome browser
AA seq
1051 aa
AA seq
DB search
MMAAEVSSEDTGSVTTGTGVAGGGGQETAPFPYYPKSGRVRVTDLGQGPAPTLRQHSNTS
PDSLPDMSMMYPMSSGDMSGPVLSAHGSGGAGGGHSVFQGTSSGTVGGMCCSPTSEGPAS
QISPTSTGPDGPTVFPPLPPPPPPPPGCGGLGGTMDESDMQDGPEYEEEEVVFPLSAPPT
NQWYHGKLDRTIAEERLRQARNPGSYLIRESDRRPGSFVLSFLSMTNVVNHFRIIAMCGD
YYIGGRRFSSLSDLIGYYSYVSCLLKGEKLLSPVAPPEPVEDRRRVRAILPYTKVPDTDE
ISFLKGDMFIVHNELEDGWMWVTNVRTEEQGLIVEDLVEEVGREEDPHEGKVWYHGKITK
QEAYNLLMTVGQVCSFLVRPSDNTPGDYSLFFRTNENIQRFKISPTPNNQYMMGGRYYNS
VDDIIEHYKKEQIVEGYNLKEPVSVQHQEQVLTDTVDGREIYNTIRRKTKDAFYKNIVKK
GYLLFNKGKGKRWKNLYFILEGNDAQLIYFESEKRATKPKGLIDLSVCSVYGVHDSLFGR
PNCFQIVVQHFSEEQYIFYFAGEAPEQAQDWMKCLQTFCSNLRKTTQPTSNKRLRQVSSL
MLYVEEAHKLPVKYFTNPYCNIYLNSVQVAKTHHREGQNPVFTEEFIFDDLSSEINRFEI
SLSNKTKKSKESDILFMRCQLNRLQKGQMIDEWFPLSSHVPLKGIEPGSLRVRARYSMEK
IMPEEEYSEFKEMILQKEFHVIYALAHVCGQDRTLLASLLLRIFRHEKAEAPLLRTLNDR
EINMEDEATTLFRATTLASTLMEQYMKATATPFVHHALKDTILKIMESKQSCELNPSKLE
KNEDVNLNLAHLLNILSELVEKIFMAAEILPPTLRFIYGCLQKSVQQKWPTNTTMRTRVV
SGFVFLRLICPAILNPRMFNIIADPPSSTAGRTLTLVAKSVQNLANLVEFGAKEPYMEGV
NPFIKNNKHRMIMFLDELGNVPDLPEATEHFRTDLSRDLAALHEVCATHSDELRTLSNER
GAQQHVLKKLLAITELLQQKQAQYAMSNSNR
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgcggaggtcagcagtgaggatacgggctcggtcacgacagggacaggggtg
gcaggcggaggaggccaggagacggcccctttcccctactatccgaagtcgggcagagtg
cgagtaactgatttgggacaaggacctgcaccaaccctccgccaacattcaaacacatcg
ccggactcacttcccgacatgagtatgatgtaccccatgtctagtggggatatgtccgga
ccagtgctgtccgcacatgggagtggcggagcaggaggtggacactcagttttccaagga
acaagctcagggaccgtgggcggcatgtgctgctctcccacctccgagggtccagctagt
cagatttcacccacatcaaccggcccggatgggcccactgtcttccccccactcccacca
cctcctcctccccctccaggctgtggggggctcggcggcactatggatgaaagcgacatg
caggatggaccggaatacgaggaagaagaggtggtgttccccctctctgcacctcccacg
aaccagtggtaccatggcaagctagaccgaaccattgctgaggagcggctgcgccaggcc
cggaaccctggcagctacctcatcagggagagtgaccgccggcccggttcctttgtcctg
tctttcctcagcatgaccaatgtggtcaaccacttcaggattatcgccatgtgtggggac
tattacattggtgggcggcggttttcttctctgtcagacctgattggttactacagctat
gtgtcttgcttgttaaaaggagagaaactgctatcaccagtggcgcccccagagcctgta
gaagacaggaggagagtcagggccatacttccatacaccaaagtgccagatactgatgag
atcagcttcctaaaaggggacatgtttattgttcacaatgaactggaagacggctggatg
tgggtgaccaacgttcgtacagaggagcagggcctcattgtggaggatctggtggaggaa
gtggggcgagaagaggatccacatgagggaaaagtttggtatcacggaaagatcaccaag
caagaagcctacaacctgctgatgacagttggccaggtgtgcagttttcttgtccggcca
tcagacaacacacctggggactactccctcttttttcgcaccaatgaaaacatccaaagg
tttaagatctcccccacccctaacaaccagtacatgatgggagggaggtactacaacagt
gttgatgacatcatcgagcattacaagaaggaacagattgttgagggctacaacctgaaa
gaaccagtttcagtgcagcaccaggaacaagtacttactgacacagtggatgggagagaa
atctataacactatcagacggaaaacaaaagacgctttctacaaaaacattgtcaagaaa
ggctacctcctgttcaacaaaggcaaaggcaaacggtggaagaacctttactttatcctg
gaaggtaacgatgcccagctcatctactttgagagcgagaagagagccaccaaacccaaa
gggttgatcgacctaagtgtgtgctccgtgtatggtgtgcatgacagtctgtttggcagg
ccaaactgtttccagattgttgtccagcactttagtgaggaacagtacatattctacttt
gcgggagaggctccagagcaggcacaggattggatgaaatgccttcaaactttctgcagt
aacctaaggaaaaccactcagcccacctctaacaagaggcttagacaggtgagcagctta
atgctgtatgtggaggaggcccacaagctgccggtgaagtattttaccaacccctactgc
aacatttacctgaacagcgtccaggtggctaagacgcaccatagggaagggcagaacccc
gtcttcacagaggagttcatctttgatgatttgtcaagtgaaatcaacagatttgaaatc
agcctgagcaacaaaacgaaaaagagcaaagaaagtgacatcttgttcatgcgttgccag
ctgaaccgtctgcaaaagggccagatgattgatgagtggttccctctcagctcccacgtg
cctctgaagggaatcgagccaggctccttacgcgtacgtgcccgctactccatggagaag
atcatgcccgaagaggagtatagcgagttcaaagagatgatcctgcagaaagagtttcat
gtcatctatgctctggcccacgtgtgtggtcaggaccgcaccttactggcgagcctcctc
ctacggatcttcagacacgagaaggctgaagcccccctactcaggacactcaatgacaga
gagattaacatggaagatgaggccacaacattgttcagagcgaccactctagccagcact
ctgatggagcaatacatgaaggccacagccaccccttttgtacaccacgctctcaaggac
accatcctcaagatcatggagagcaaacagtcctgtgagttgaacccatccaaactggaa
aagaatgaggatgtgaacctgaacctggctcatctcctcaacatcctgtctgagctggtg
gagaagatcttcatggctgctgagatcctaccaccgacactgaggttcatctacggttgt
ctgcagaagtctgttcagcagaaatggcctaccaacaccaccatgcggacgagagttgta
agtggctttgtctttctaagactgatctgtcctgccatcctcaaccccagaatgttcaac
ataattgctgaccctccatcttcaacagcaggcaggaccctcacactggtggccaagtct
gtccaaaacctggccaacctggttgaatttggtgctaaggagccctacatggagggtgtg
aaccctttcatcaaaaacaacaaacataggatgatcatgtttctggatgagttagggaac
gtccctgacctccctgaagccacagagcactttaggacggacctgtcccgggacctggct
gcgttacatgaggtctgtgccacacactcagacgagctccggacgctgagcaatgagagg
ggagcgcagcagcatgtgttgaaaaagctgctggccatcacagagctcctccagcagaag
caggctcagtatgccatgtccaacagcaacaggtag
DBGET
integrated database retrieval system
