Lates calcarifer (barramundi perch): 108878619
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Entry
108878619 CDS
T04895
Symbol
pbx3b
Name
(RefSeq) pre-B-cell leukemia transcription factor 3b isoform X1
KO
K15610
pre-B-cell leukemia transcription factor 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108878619 (pbx3b)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
108878619 (pbx3b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBC
Homeobox_KN
Homeodomain
DUF7260
LZ3wCH
HTH_NDX
TraG-D_C
UCH
Motif
Other DBs
NCBI-GeneID:
108878619
NCBI-ProteinID:
XP_018525013
UniProt:
A0A4W6FQ58
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Position
LG13:16091172..16149444
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AA seq
486 aa
AA seq
DB search
MSFSICVAQCTDSLSATMDDQARIMQSIGGVSLAGHSVQGGMALPPPHGHDGTDGDGRKQ
DIGDILHQIMTITDQSLDEAQAKKHGLNCHRMKPALFSVLCEIKEKTGLSIRGAQEEDPP
DPQLMRLDNMLLAEGVAGPEKGGGSAAAAAAAAASGGAADNSIEHSDYRAKLTQIRQIYH
TELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEA
VMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQGVG
STITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVNAAHAAAAAVQNSQANSPTTP
NSGFQMKDEEFQLDSAESKNTLLSNMFTGSSGSFNLPNSGDMFLSMQSLNGDSYQGAQVG
ANVQSQVDTLRHVISQTAGYNDALGGNTMYSPHGLNANGGWQDATTPSSVISPTEGPGSV
HSDTSN
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttcaatttgtgtggctcagtgcacagactctttatcggctactatggacgat
caagcccggatcatgcagtcgatcggcggtgtcagtctggctggccactcggtacaggga
ggcatggcactgccgcctccacatggacacgatgggacagacggagacggaagaaaacaa
gacattggtgacattctccatcaaataatgaccataactgatcagagtctggacgaggcg
caagcaaagaaacatggactgaactgtcacagaatgaaaccagcactcttcagcgttctc
tgtgaaatcaaagaaaagacaggtctcagcatccgcggcgcccaggaggaggacccccca
gacccccagctcatgcgtttagacaacatgctgctcgcggagggcgtggcaggaccagag
aaaggtggcggatctgctgctgccgcagctgcagccgcggcctcgggcggggcggccgac
aactccattgaacattccgactacagagccaaactcacccagatcagacagatctaccac
acagagctggagaagtacgaacaggcatgtaacgaattcactacccatgtgatgaacctg
ctgagggaacagtctcgcacgcggcccatctctcccaaagagattgagcgcatggtggga
atcatccaccgcaagttcagctccatccagatgcaactgaaacagagcacctgtgaggct
gtcatgatcctgcgctccagattcctcgatgccaggcggaaaaggagaaacttcagcaag
caggcgacagaaattttgaacgaatacttctactcgcacctcagcaacccgtatccgagc
gaggaggctaaagaggagctggccaagaagtgcagcatcacagtttcccagggggtggga
agcaccatcacagtatcacaggtatccaactggtttggcaacaaaaggatccggtacaag
aaaaatatcggcaagtttcaggaagaagccaacctgtatgccgccaagactgctgtaaat
gcagcacacgctgcagccgctgcagtgcagaacagccaggccaactcccctaccacacct
aactccggattccagatgaaagatgaagagtttcagctggattctgcagagagcaaaaac
actcttttaagcaacatgtttactggttcttcaggttcttttaacctcccaaactctggg
gacatgttcttgagcatgcagagtctgaatggggattcttaccaaggggcacaagtcgga
gccaatgtacagtcacaggtggataccctgcgccatgttatcagtcagacggcaggatac
aatgatgctcttgggggcaacacgatgtatagtccacatggcttaaatgctaatggggga
tggcaagatgcaacgactccgtcttctgtaatatctccgacagaaggacctggaagtgtg
cactccgatacctcgaattga
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