Lates calcarifer (barramundi perch): 108878826
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Entry
108878826 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: selenocysteine lyase
KO
K01763
selenocysteine lyase [EC:
4.4.1.16
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00450
Selenocompound metabolism
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
108878826
Enzymes [BR:
lcf01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
108878826
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Paralog
GFIT
Motif
Pfam:
Aminotran_5
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
108878826
NCBI-ProteinID:
XP_018525321
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Position
LG17:4142912..4147555
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AA seq
440 aa
AA seq
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MAKQTDDFILVTGHAFTDHTFHHYPEMNLDRIYMDYNATTPPEPEVIKAVTEALQEAWGN
PSSNYIAGAKAKAIINHSRENVARMVGGKAEDIIFTSGGTEANNLVLHTAVEHFRKNCRA
AEQGEAHSNGCTGLPHIIISNVEHDSVRLVAEHLQRDGKADVTSVPVSKTTARVEVEDVI
AAVRPNTCLISVMLANNETGAIMPIQEICQRIKSLNKQHERLRILLHTDAAQALGKIRVD
ACELGVDYLTIVGHKFYAPRIGALYVNGPGTRTPLYPMLFGGGQERNFRPGTENTPMIAG
LGKAAELVTSNLSDYESHMRSTKLYLEERLRAVFKDRIRFNSHYPGSDNLPNTCNVSILG
PTLQGWRVLSNCRRLLASVGAACHSGSGNRPSHILLSCGVPSEVAANALRLSVGRGTTKE
DVDIVVEDLRETVQLLEEMN
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacagactgatgacttcatcctggtaacaggtcacgccttcactgaccatacc
tttcatcattatccagaaatgaatctggataggatctacatggactacaatgctaccact
ccaccagaaccagaagtgatcaaggctgttactgaagccctgcaggaagcctggggaaac
ccaagtagcaactatatagcaggtgccaaggccaaggcaatcattaatcactccagagag
aatgtggcaagaatggttggagggaaagcagaggacatcatctttacctcaggtggaaca
gaggccaataatctggtgctccacactgctgtagagcacttcaggaaaaactgcagggct
gcagagcaaggtgaagcacactccaatggatgcactggccttcctcacattatcatctct
aatgtggaacatgactcggtcagactagtagctgagcacctacagagagatggcaaggca
gatgttacatctgtgcctgtgtccaagacaacagcccgtgtagaggtggaggatgtcatt
gctgcagtgcgtcccaacacttgtctcatctccgtcatgctggccaacaatgagacagga
gccattatgccgatccaagagatctgccagagaataaaatctctcaacaagcagcacgag
cggctcaggatcctgctccacaccgatgctgcccaggctctggggaaaatcagagtagac
gcctgtgaactaggcgtggattacctcaccatagtgggacacaagttctatgcccctcgg
atcggtgctttgtacgtgaacggccctggaacaagaacaccattgtatccgatgctgttt
ggaggaggacaggagagaaacttcaggccaggcactgagaacacaccaatgattgctggt
ctgggaaaggctgcagagctggtgacctctaatctgtcagattatgagagtcatatgcga
agtaccaaactttatttggaagagcgactgagggctgtctttaaagacaggatccgcttc
aacagccattaccctggctccgataacctccccaacacatgtaatgtgtctatcctgggc
ccaacattacaaggctggagagtattgtccaactgtaggaggctgctggccagtgtcggt
gctgcctgccactcaggcagtggaaacaggccttcccatatccttctgagctgtggcgtc
ccctcagaggtggcagccaatgcattaaggttgagcgtgggcagagggacaaccaaagaa
gatgtggatatagttgtggaggatctgagggaaactgtgcagctgttggaagaaatgaac
tga
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