Lates calcarifer (barramundi perch): 108878855
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Entry
108878855 CDS
T04895
Symbol
smad5
Name
(RefSeq) mothers against decapentaplegic homolog 5
KO
K16790
mothers against decapentaplegic homolog 5
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04081
Hormone signaling
lcf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108878855 (smad5)
09133 Signaling molecules and interaction
04081 Hormone signaling
108878855 (smad5)
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Gene cluster
GFIT
Motif
Pfam:
MH2
MH1
IRF-3
DUF4223
Motif
Other DBs
NCBI-GeneID:
108878855
NCBI-ProteinID:
XP_018525359
UniProt:
A0A4W6FSP0
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Position
LG8:complement(4428664..4435409)
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AA seq
471 aa
AA seq
DB search
MTSMSSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEDLEKALSCPG
QPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLEVCEYPFGSKQKE
VCINPYHYKRVESPVLPPVLVPRHSEFNPQHSLLVQFRNLTHNEPHMPLNATFPESFQQP
HSGGGSSSGGGGSFPISPNSPYPPSPASSGTYPNSPASSGPSSPFQLPADTPPPAYMPPD
EQLGQESQSMETSSSLVPQNMARGDVQPVEYEEPSHWCSIVYYELNNRVGEAYHASSTSV
LVDGFTDPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDTSIF
VQSRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFEAVYELTKMCTIRM
SFVKGWGAEYHRQDVTSTPCWIEVHLHGPLQWLDKVLTQMGSPLNPISSVS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgacctccatgtccagtctcttttccttcacaagtccagcagtcaaacgcctgcttggc
tggaagcagggagacgaggaggagaaatgggcagaaaaggcagtggatgcgctggtgaaa
aagctgaagaagaaaaaaggtgccatggaggacctggagaaagccctgagctgcccggga
cagcccagcaagtgtgttaccattccaagatcactggacggccggctacaggtttcccac
aggaaaggtctgcctcatgtcatctactgccgagtgtggcgctggcctgacctccagtcc
caccacgagctcaaacccctggaggtgtgcgagtacccgtttggctccaaacagaaggag
gtctgcatcaacccatatcactacaagcgagtggagagtcccgtgctccctcctgtcctg
gtaccacggcacagcgagttcaacccacagcacagcttgctggtacagttccgcaacctc
acccacaatgagccacacatgccccttaacgccacctttccagagtccttccagcagcca
cacagcgggggcggcagcagcagcggtggaggcggctcttttcccatttctcccaactct
ccgtatcctccttctccagccagcagtggtacttacccaaactctcctgccagctcgggg
ccctccagtccattccagctcccagctgacaccccacccccagcctacatgccccctgat
gagcagctgggccaggagagccagtccatggaaacaagcagcagcctggtgccacagaac
atggccagaggagatgtgcaaccagttgagtatgaggagccgagccactggtgctctatt
gtctactatgaactcaacaatcgtgtaggtgaggcttaccacgcctcttcaaccagcgtg
cttgtggacggcttcactgacccttcaaacaacaagaaccgcttctgcctcggactgctg
tccaacgtcaaccgtaactccacaatcgaaaacacccgtcgacacattggcaaaggagta
cacctgtactatgtgggaggggaggtgtatgcagagtgcctcagtgacaccagcatcttt
gtccagagccgtaactgtaattaccaccatggcttccaccccaccactgtctgcaagatc
cccagtggatgtagcctcaagattttcaacaaccaggagtttgctcagcttctggctcag
tcagtcaaccacggctttgaggctgtttatgagcttaccaagatgtgtaccattaggatg
agctttgtcaagggctggggagccgagtatcaccgacaggacgtcactagcaccccctgc
tggatcgaggtgcatctgcatgggcccctccagtggctggacaaggtgctaacacaaatg
ggttctcctctcaacccaatctcctctgtgtcctaa
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