Lates calcarifer (barramundi perch): 108879302
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Entry
108879302 CDS
T04895
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2
KO
K04943
potassium intermediate/small conductance calcium-activated channel subfamily N member 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108879302
Ion channels [BR:
lcf04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
108879302
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
DUF7310
DALR_1
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
108879302
NCBI-ProteinID:
XP_018526058
UniProt:
A0AAJ7LLW7
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Position
LG9:9740850..9765010
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AA seq
677 aa
AA seq
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METPLQLQNDFFPEQQFQHCKYQHYCGREDRLGKQHDQCCTCNNCTCDARKSLVFRGTSP
TTVGTLRTPSETSSRQGCQYSVCEFTPSSHGSSSRHHHPHHQQQQQQQHCRDRQRGSLGS
SHKDSNSYNEIAMSSCRYNGGVMRPLSNLSSSRRNIHEFDSESQPLQPISAADASDTLVS
KPENNSTTLMPYASGDGGGGCSHSSGKSGKKKNQNIGEKLGHRRALFEKRKRLSDYALIF
GMFGIVVMVIETELSWGAYGKESLYSLALKCLISLSTIILLGLIIIYHAREIQLFMVDNA
ADDWRIAMTYERIFFICLEILVCAIHPIPGNYTFTWTARLAYSYVPSKTDADVDIILSIP
MFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFTISL
WIIAAWTVRACERYHDNQDITSNFLGAMWLISITFLTIGYGDMVPNTYCGKGVCLLTGIM
GAGCTALVVAVVAKKLELTKAEKHVHNFMMDTQLTKRVKNTAANVLRETWLIYKNTKLVR
KMDHARVRKHQRKFLQAIHQARKLRSVKMEQRKLNDQANSLVDLAKTQNIMYDMISDLNE
RGEDMEKRIALLETKLETLLSNLQALPGLISQVISQQHRDFLEVQLQPYDKHSPERSQSV
SRRRSSSTAPPTSSESS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggaaacccctttgcagctgcagaacgatttctttccagagcagcagttccaacactgt
aagtatcagcactactgcggacgggaggatcggctcggtaagcagcacgaccagtgctgc
acctgcaataactgcacctgtgatgcgagaaaaagcctcgtatttcgcgggacgtcgccg
accactgtgggaactttaaggacaccttcggaaacgtcttcgaggcaaggttgccagtac
agcgtctgcgagttcacaccctctagtcatggtagttcatccagacatcatcatcctcac
catcagcagcagcagcagcagcagcattgccgcgatcggcagcggggcagcctgggcagc
agccacaaagacagtaactcctacaatgaaatagccatgagcagctgcagatacaacggc
ggcgtaatgcggccgctgagcaacttgagctcgtcccgcagaaacatacacgagtttgat
tccgagtcccagcctttacagcccatctcagccgcagatgcgtcggacactctagtatcc
aagccggagaataattccaccaccctgatgccttacgcatcgggagacggagggggaggc
tgcagccacagcagcggcaaatcggggaaaaagaagaaccagaacattggggaaaagctc
ggacacaggagggccttgtttgagaaaaggaagcggctcagcgactatgctttaatcttt
gggatgtttgggatcgttgttatggttatagagactgaactctcatggggagcctatgga
aaggagtccctgtattcattagctctaaaatgcctgataagcctttctacaatcattctc
ctggggctgattatcatataccatgcaagagagatacagttatttatggtggacaatgca
gctgatgactggaggatagccatgacatatgagcgcatcttcttcatctgcctggagatc
ttggtgtgcgccatccaccctatcccagggaactacaccttcacctggaccgcacgcctg
gcctactcctacgtgccatccaagacggatgccgatgtggacatcatcctgtccatcccc
atgttcctgcggctgtacctcatcgctcgtgtcatgctgctgcacagtaagctcttcacg
gatgcctcatcccgcagcatcggtgcactcaacaagattaacttcaacacacgctttgtg
atgaagaccctcatgaccatctgtcccggcactgtgctcctggtcttcactatctcgctg
tggatcattgctgcatggactgtgagagcttgcgagaggtaccatgacaaccaggacata
accagcaactttctaggagccatgtggttgatctcaatcacgtttcttaccattggatat
ggggatatggtcccaaacacatactgtgggaaaggagtctgcctcctgactggcattatg
ggtgctggctgcactgccttggtggtggctgtggtggcaaagaaactggaattaaccaaa
gctgaaaaacatgtccacaattttatgatggacacccagctaacaaaaagagtgaaaaac
acagctgcgaatgttctcagggagacatggctcatctacaagaacaccaaactggtgagg
aagatggaccatgccagagtcaggaagcaccagaggaaatttctccaagccattcaccaa
gctcgaaaattgagaagtgttaaaatggagcaacgcaagctgaatgaccaagcaaactca
ctagtggaccttgctaagactcagaacatcatgtatgacatgatatcagacttgaatgag
agaggcgaggacatggagaagaggattgccttgctggagacaaagctggagactctactg
agtaacttgcaggctctgccgggactcatcagccaggtcatcagccagcagcacagggac
ttcctggaggtgcagctccagccttatgacaaacacagccctgagcgctcacagtcagtg
tcccgacggaggtcgtcctccacagcaccgcccacctcctccgagagcagctag
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