Lates calcarifer (barramundi perch): 108879430
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Entry
108879430 CDS
T04895
Name
(RefSeq) receptor-type tyrosine-protein phosphatase C isoform X1
KO
K06478
receptor-type tyrosine-protein phosphatase C [EC:
3.1.3.48
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04514
Cell adhesion molecules
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108879430
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108879430
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108879430
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lcf04090
]
108879430
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
108879430
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
108879430
CD molecules [BR:
lcf04090
]
Proteins
108879430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
DUF6773
ECSCR
YqhR
DUF5385
Vpu
Motif
Other DBs
NCBI-GeneID:
108879430
NCBI-ProteinID:
XP_018526211
UniProt:
A0AAJ7PI78
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MAGLCGLKILLLWIEIISLANCQDSSGETGNGNGPENSNPSPPHTTAVSTSPSLSTVSVI
SSPASTAAKSTSPSVPIVSITPSPPHTTAAAPAMSSDTPTAAAQPPLISSAPTSVSTNQT
NNSTTMSATPTTHPNKTNIQTDSDNKTSPAVTQLNTTVTPTTQAPPTTPAPPPQCSYTVT
PIKFGFQINITSSTTGNYNITINEEGRPDTENKSMVQHSSQNSSHEIKHLKPCTEYEHSV
TFIDTSAGRENIHCNSTEKDNKTTTIEMSKDDIKDATSCIPGYVCYQTDWNITSLQSTPN
KIQDERCGSKTLCVKLGYNDICTDFTTTITSETCGNSSFNFTKNISIDFLNVSEINQTAP
TELPAKINTTLPPNCKSLSIDYSCRERGRVNESKKLSELEPFTDYNCTGQIKDNDGTVKK
TTAPVHIYIKCDFDINTKKSSTNTSIELSSTTTSKNCQQVPQNLLYNCSCSRHPPGYKIT
ANNHPPGGTCHVTGLQPYTNYTCEVQPIYNNKRVPESKSYSVTEKTKSGIPDPVTNLKVT
VPEHNVIHVKCDHSKNSKGPENKCRVRLITGGVIVDKTDTPNSNLEFRDLSYSTTYTVKV
TVFNGDFESEPKTDTVHTQYNDKAVIGFFIFLIILIISVVVAVVVYKLYIKKRKESRNGV
NEGVTLESTAIYMNVPPREWHHKETH
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcagggctctgtggtctcaagatcctgctgctctggatcgagatcatcagtttagcc
aactgtcaagacagtagtggtgaaactggaaatggaaatggaccagaaaattcaaacccc
tcacctccacacaccacagcagtttccacttcaccttcgctttccactgtgtctgtcatc
tcctcacctgcaagcacggcagcaaaatctacttcaccctcagtacccattgtatctatc
accccctcacctccacacaccacggcagcagctcctgccatgtcttcagacactccaact
gctgccgcccaacctccactcatctcgtcagcccccacctcagtctccacaaatcagaca
aacaattcaactaccatgtctgccactcctaccacacacccaaacaaaaccaacatccaa
acagactctgacaacaagacctcacctgcagtcacccagctcaacaccacagtgactcct
accacccaagctcctccaaccactccagctccacctccacagtgttcttacactgtaaca
cccatcaagtttggcttccagattaacattacaagctctaccactggtaactacaacata
accattaatgaagaaggccgaccagatactgaaaacaaatccatggttcagcactccagt
caaaactcatcacatgaaatcaaacacctgaaaccctgtactgaatacgagcactctgtg
acattcattgatactagtgctggcagagaaaacatccactgtaacagcactgaaaaggat
aataaaacaacaacaattgaaatgagtaaagacgacattaaagatgccaccagctgcatc
cctggatatgtttgttaccaaactgattggaacatcacctctttacaatcaacaccaaat
aagattcaagatgagcgatgtggcagtaaaacactctgtgtcaaacttggttacaatgac
atttgcacagattttactacaactatcacatcagaaacctgtggaaactcttcctttaac
ttcaccaaaaacatctctatagatttcttgaatgtaagtgaaataaatcagactgctccc
actgaacttcctgcaaaaataaacacaacattacctccaaactgtaaaagcctctccatt
gattacagctgtcgggaacgtggcagagtcaatgagtctaagaaactgtctgagctggaa
cctttcacagactacaactgtactggtcagatcaaggacaacgatggcaccgtaaaaaaa
accacagctcctgttcacatctacattaaatgtgattttgatatcaacacaaagaaaagc
tcaaccaatacatccattgagttgagttcgaccacaaccagtaagaactgtcaacaggtc
cctcaaaaccttttatacaactgcagttgtagccgtcatccccctggttacaagattaca
gctaacaaccatccaccaggaggaacatgtcatgttactggactacaaccatacactaat
tacacctgtgaagtccaacccatctataacaacaagagagttcccgaatcaaaatcatat
tcagttacagagaaaactaagagtggaataccagatcctgttactaacctgaaggtgaca
gttccagagcataatgtgattcatgtaaaatgtgatcattctaaaaactctaaaggacct
gaaaataaatgcagagtgcgacttattactggtggagtcattgtggataagactgacaca
ccaaattctaaccttgaattcagagatctgagctactctacgacctacacagtgaaggtg
actgtttttaatggagactttgagagtgagcccaagacagacacagttcacactcagtat
aatgacaaagctgtcatcgggtttttcatcttcctcatcatcctcatcatatctgttgtg
gtggctgtggtcgtctacaagctgtacattaagaagcgcaaagagtccagaaatggtgtg
aatgaaggtgtgacgcttgaatcaacagcaatttatatgaatgtaccacctcgtgaatgg
catcataaagaaactcactga
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