Lates calcarifer (barramundi perch): 108879980
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Entry
108879980 CDS
T04895
Symbol
tp53
Name
(RefSeq) cellular tumor antigen p53 isoform X1
KO
K04451
tumor protein p53
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04110
Cell cycle
lcf04115
p53 signaling pathway
lcf04137
Mitophagy - animal
lcf04210
Apoptosis
lcf04216
Ferroptosis
lcf04218
Cellular senescence
lcf04310
Wnt signaling pathway
lcf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108879980 (tp53)
04310 Wnt signaling pathway
108879980 (tp53)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108879980 (tp53)
09143 Cell growth and death
04110 Cell cycle
108879980 (tp53)
04210 Apoptosis
108879980 (tp53)
04216 Ferroptosis
108879980 (tp53)
04115 p53 signaling pathway
108879980 (tp53)
04218 Cellular senescence
108879980 (tp53)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108879980 (tp53)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108879980 (tp53)
03036 Chromosome and associated proteins [BR:
lcf03036
]
108879980 (tp53)
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108879980 (tp53)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
p53
108879980 (tp53)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
108879980 (tp53)
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
Check point factors
Other check point factors
108879980 (tp53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
P53
P53_tetramer
P53_TAD
COR-B
PH_EXO84
Motif
Other DBs
NCBI-GeneID:
108879980
NCBI-ProteinID:
XP_018526942
UniProt:
A0A4W6CU25
LinkDB
All DBs
Position
LG14:8174723..8181411
Genome browser
AA seq
380 aa
AA seq
DB search
MMEEQGLDSLQLSQGLAMSQDSFQQLWDTVATPSISTIPAAMTMDQETWRPDGQMDIMLI
NDHVLTDGFDENLFENLPPEMVTKDGVTPPASTVPVTTDYPGEYDFQLRFQKSGTAKSVT
STYSELLNKLYCQLAKTSPVEVLVSKEPPQGAVLRATAVYKKTEHVADVVRRCPHHQNED
AAEHRSHLIRVEGSQRAQYFEDPHTKRQSVTVPYEPPQLGSEMTTILLSFMCNSSCMGGM
NRRPILTILTLETTEGLVLGRRCFEVRVCACPGRDRKTEEDNRTKMQNGTKQTKKRKSNP
APDTTSVKKSKSASSAEEEDKDVFVLHVRGRERYEMLKKINDGLELLDKESKTKSKVKQE
VPVPSCGKRLLQRGERSDSD
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagagcagggtctcgacagtctgcagctgagccagggcctggcaatgagccag
gactcctttcagcagctgtgggataccgtagcaactccctccatctccaccatcccagca
gcaatgactatggatcaagagacctggaggccagatggacagatggatattatgctcatc
aatgaccacgtgctgactgacggctttgatgagaatctgtttgagaatctgcccccagag
atggtgactaaagatggtgttactcctccagcctccaccgtcccggttacaactgactat
ccaggggaatatgacttccagcttcgcttccagaagtctggcacagccaaatccgtcacc
tccacttattcggagcttctcaacaagctgtactgccagctggcaaaaaccagcccagtg
gaagtgttggtgagcaaggagcctccgcagggtgctgtcctcagggccacggcggtttat
aagaagactgagcatgtggctgatgtggtccgcagatgtccccatcaccagaatgaggat
gctgccgagcatcgcagccatctgatcagagtggagggcagccagagggctcagtacttt
gaagacccgcacactaagaggcagagtgtgaccgtcccttacgagccaccccagttgggc
tctgagatgacgaccatcctgctgagcttcatgtgcaacagctcctgcatgggcggcatg
aaccgcaggccaatcctcaccatcttgaccctggagaccaccgagggactggtgttgggc
aggagatgctttgaggtccgagtctgcgcatgtccaggcagagaccgcaaaactgaggag
gataaccgcaccaagatgcagaacggcaccaagcaaaccaagaaaagaaagagcaaccct
gctccagacaccacctcagtgaagaaatccaagtctgcctccagtgcagaggaggaagac
aaagatgtctttgttctgcatgttcgtggtcgggagcgttacgagatgctaaagaaaatc
aatgatggtctagagctgcttgacaaagaaagcaaaaccaagtctaaggtgaaacaagag
gtccctgttccctcctgcggaaagagactgctacagagaggagagcgcagcgacagcgac
tga
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