Lates calcarifer (barramundi perch): 108880374
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Entry
108880374 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich glioma-inactivated protein 1a
KO
K25428
leucine-rich repeat LGI family member 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
108880374
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GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
Rax2
Motif
Other DBs
NCBI-GeneID:
108880374
NCBI-ProteinID:
XP_018527369
UniProt:
A0AAJ7PJ24
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Position
LG16_LG22:complement(8992615..8998382)
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AA seq
545 aa
AA seq
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MENKRKMPRRSPLLRLLVVASVLLVVDTKKAKLRCPLSCTCTKDNALCESAGQIPRGFHS
DVISLSFVKSEFTEIPKESFIHTPALHLLLFTANNLESINEDAFLGLPHLEYLFIENNQI
KSISPQAFRGLKTLVHLSLAYNNLETLPKDLFKGLEALTKVDLRGNQFICDCKLKWLVEW
IYNTNATVDQIYCKGPALQLDKKINDLAPQSFDCITTEFASYQSLKFESISVEAFSFGND
QYVVFAQPFIGKCSFLEWDHVEMVFRNFDDINSTSTVICKPLVIDNQLFIIVAQLFGGSH
IYKRDTSANKFIKLQGIDILKIRKPNDVETFQIDGESFFVIADSSKAGSTTIYKWNGNGF
YSHQSLHPWYRDTDVEYMEISSKPHLILSSSSQRPVIYQWNKSTKLFDRRTDIPEMEDVY
AVKHFQVKSDLFICLTRFIGDSKVMRWDGALFRELQTMPSRGSMVFQPFSVGNWQYAILG
SDYSFTQVYRWDAKKGEFVHFQELNIQAPRAFSPVSIDNRQFLLASSFKGKTQIYEHLVI
DLSNE
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaacgcaagatgcccagaagatcgcccctgctccggttactcgtggtggcg
tctgttttacttgtagtggacaccaagaaagccaagcttcgctgtcctctgtcatgtaca
tgtaccaaagataacgcgttgtgcgaaagcgcaggacagatccctcgcggctttcactcc
gatgtcatatcactatcattcgtcaagtctgaattcactgaaatcccgaaagagagcttc
atccacacgcctgccctgcatctcctcctctttacagcaaacaacctggaatccataaat
gaggacgctttccttggtcttcctcatctggagtatctgttcattgaaaataaccaaatc
aagtcgatatcaccacaggctttccgcggactaaaaaccttagtgcatctgagtctagcc
tacaataatctggagaccctgcccaaagatttgttcaagggtcttgaggccttgacaaaa
gtagacttgcggggaaaccagttcatctgcgactgtaaactcaagtggttggtggagtgg
atatacaacaccaatgccacagtggatcagatttactgcaaaggcccggccttgcagctg
gacaagaagatcaacgatctggcaccgcagtcttttgactgcatcaccacagagtttgct
tcctaccagtctctgaagtttgagtccatatcggtggaggcgttttcctttgggaatgac
cagtatgtggtgtttgctcagcctttcattgggaaatgcagctttctagagtgggatcat
gtggagatggtcttcagaaactttgacgatatcaacagcacatccacagtgatttgcaaa
ccactggtcattgacaaccagctttttatcatcgtggctcagctgtttggtggctcacac
atctataagcgtgacacctctgcaaataaattcatcaagcttcaaggcattgatatcctc
aaaattcgcaaaccaaacgacgttgagactttccagatcgatggagaatctttctttgtg
atagcagacagctccaaggccggttccaccaccatctacaagtggaacggcaatggcttc
tactctcaccagtcactccacccatggtaccgggacaccgatgtggagtacatggagatt
tcatccaaacctcacctgatcctgtccagcagctcccagaggccagtcatctaccagtgg
aacaaaagcaccaagctgttcgacagacgcaccgacatcccagagatggaggacgtctac
gctgtgaagcatttccaggtcaagtctgacctcttcatctgcctgacacgcttcataggt
gactccaaagtgatgcgctgggacggggccctctttagagaattgcagaccatgccctct
cgtggctccatggtgttccagcccttctctgtgggcaactggcagtatgccatcctgggc
agcgactactctttcacccaggtataccgctgggatgccaagaagggcgagtttgtccat
ttccaggagctgaacatccaggcgccgagagccttctctccagtctccatagacaaccgg
cagttcctgctggcctccagtttcaaagggaaaactcagatctatgagcatctggtcatt
gatctgagcaatgagtga
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