Lates calcarifer (barramundi perch): 108880732
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Entry
108880732 CDS
T04895
Symbol
cd4-1
Name
(RefSeq) CD4-1 molecule
KO
K06454
T-cell surface glycoprotein CD4
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03250
Viral life cycle - HIV-1
lcf03260
Virion - Human immunodeficiency virus
lcf04060
Cytokine-cytokine receptor interaction
lcf04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108880732 (cd4-1)
03260 Virion - Human immunodeficiency virus
108880732 (cd4-1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108880732 (cd4-1)
04514 Cell adhesion molecules
108880732 (cd4-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lcf04090
]
108880732 (cd4-1)
CD molecules [BR:
lcf04090
]
Proteins
108880732 (cd4-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
V-set
Ig_2
I-set
C2-set
DUF6249
TMEM154
RIFIN
Orf78
Ig_6
DUF4381
Pilin
TM_ErbB1
ASFV_J13L
EphA2_TM
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
108880732
NCBI-ProteinID:
XP_018527926
UniProt:
A0AAJ7PJG0
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All DBs
Position
LG15:complement(9923656..9940648)
Genome browser
AA seq
467 aa
AA seq
DB search
MKNLIQSVLILISVLIAAKGAEEVIYAQVGERVILKPPAVDKYKYMYWRFGSPQGIQLAW
RNYLSGNGIDKEENKFAWSGSSLVISNIEQNNFGTYYCVTSDPPSDNLAAKQVKLVKLNV
TNPSSPLLPGESLSLACSVEDSQGDQKPNIYWQTPNGQKIKNILVKHVTSQHNGKWTCVV
KNGENEKHTQISVKVLDLSPAFSSTQYTSNSSRITIPCSFAPDITWEHFKAKDIQEVYWQ
FSPKIPSGVISGGPQRLFTLSLQDSMKWNVNQHTDLKTQDPKKGDLSLTRKLGKEEDRGD
YECIMKFKGGKILNRTVRVEVLQIISSPRPELISGQPLNLTCSTGNQLPSDVQLKWSPPK
QSSLSPPIPDPHPAKLTIPQVHTGDEGEWECTLWQGSKQLTSAVITLKIEPKLSVWMLVI
ICSAAVVVILILILIFIFYRRRQRKMRHLRHRLCQCKNPKPKGFYRT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatttaattcagtctgtcctcattcttatctctgtactcatcgcagcaaaaggt
gctgaagaggtgatttatgctcaggtgggagagagggttatcctaaagcctccagcagta
gataaatataaatatatgtactggaggtttggtagtccacagggcattcagcttgcctgg
cgcaattacctcagtggaaatgggattgataaagaagaaaataagtttgcctggtctggc
agctcactggtcatcagcaacattgaacaaaacaactttggcacatattattgtgtaacg
tctgatccaccttctgacaatcttgccgccaaacaagtcaaactagtcaaactcaatgtg
acaaacccatcctctcctctgctgcctggggaatctctgtcactggcctgcagcgtagag
gattctcagggtgaccagaagcccaacatatactggcagactcctaatggacagaaaatt
aaaaacatcctagtcaagcatgtcacaagccaacataatggcaagtggacctgtgttgtg
aaaaatggtgaaaatgaaaaacacacccagatttctgtcaaagttttggacctctcccca
gctttttcatccactcagtatacgtctaattcctcgcgtatcaccatcccctgttccttt
gctcctgatatcacctgggaacacttcaaagctaaggacatccaagaggtttactggcag
ttctcccctaaaataccctcaggtgttatttctggtggtccacagaggctcttcaccctc
tctctgcaagattcaatgaagtggaatgtaaaccagcacacagacctgaaaacacaagat
cccaaaaaaggagatctgtctttgaccaggaaactaggcaaagaagaagacagaggagat
tacgagtgcatcatgaaatttaaaggtggaaaaattctgaaccggactgtacgtgtagag
gtgttgcaaatcatctcctccccacgaccagagttaatttctggccagccgctcaacctg
acttgcagcactggcaatcagctgccatctgacgtccaactgaaatggtccccacctaaa
caatcgtccctgtcacctccgatacctgacccccaccctgccaaactcaccatcccgcaa
gtgcacacaggagatgaaggagagtgggagtgtacgctgtggcagggcagtaagcagctg
acgtcagctgtgataacgctgaaaatcgaacccaaactgagtgtgtggatgctggtaatc
atatgcagtgctgctgttgttgtaatcctcatcctcatcctcattttcatcttctaccga
cgcagacaacggaagatgagacacctcaggcatcgactgtgccaatgcaaaaaccccaag
cccaaaggattttacagaacataa
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