Lates calcarifer (barramundi perch): 108880842
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Entry
108880842 CDS
T04895
Symbol
mfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase manic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00514
Other types of O-glycan biosynthesis
lcf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
108880842 (mfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108880842 (mfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108880842 (mfng)
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
108880842 (mfng)
Glycosyltransferases [BR:
lcf01003
]
Glycan extension
O-Glycan
108880842 (mfng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Glycos_transf_2
Motif
Other DBs
NCBI-GeneID:
108880842
NCBI-ProteinID:
XP_018528082
UniProt:
A0A4W6E6D6
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All DBs
Position
LG5:3145942..3163636
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AA seq
351 aa
AA seq
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MHKKWIRRRLPVLIFTFFIILYVDFQLRTSNPPKLRVVHDSSPGALHRAIQQAPSPDNDA
QKPATNSSSGNGRHPVNEGAHVTQPKLKQEDIFIAVKTTGRFHKTRLALLLETWISKSKA
HTFIFTDTEDEDLSSEGYNMVVTGCQSDHSQQALSCKMSAEYDGFMASDKRWFCHVDDDN
YLNPDALVSLLSAFPQEGDIYVGKPSLDKPITAHELLEGNATREVRFWFATGGAGFCLSR
RLAEKMAPWASGSRFEQTSATIRLPDDCTVGFIVEKRLGISMVHCPLFHSHLENLLLISH
RSIPHQVTLSYGMFENKMNSIEVKGSFSKEDDPSRFKTVHCMLYPFTSWCP
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcataagaaatggatccgtcggaggttgcctgtcttgattttcaccttcttcatcatt
ctctacgtggattttcaattgcgcaccagcaaccctcccaaactcagagtggtccacgac
tcatcacccggtgcgctccaccgcgccatacagcaggctccctccccggacaacgacgca
cagaagccggctaccaacagcagcagcgggaacggtagacacccggtgaatgagggtgca
catgtcacccagccgaagctgaagcaagaggacatcttcattgctgtgaagaccacgggg
aggttccacaagacgcgtcttgcgctccttttggagacatggatctccaaatccaaggcg
cacacgttcattttcacagacacggaggatgaggacttaagttcagagggttataacatg
gtggtaacaggctgccagtcagatcacagccagcaggctctgtcctgcaagatgtctgct
gagtatgacggcttcatggcctcagacaagaggtggttttgtcatgtggatgatgataac
tatttgaacccagacgccctcgtctccctgctctcagccttcccccaggaaggcgacatc
tatgtgggcaaaccgagcctggacaagcccatcactgcacacgaacttctggagggcaac
gcaacgagggaggtacggttctggtttgctacaggaggagcaggtttctgtctcagtcgg
cggctggcagagaagatggctccatgggccagtggctcccggtttgagcagacatctgcg
accatccgtctccctgatgactgtacagtgggctttattgtggagaagaggttgggcatc
tccatggtccactgtcctttgttccactctcacctggaaaacctgctgctcattagccac
agaagcatcccacaccaggtgacactgagctatgggatgtttgagaacaaaatgaacagc
attgaggtgaaaggaagcttctctaaagaggacgacccctccaggttcaaaactgtccac
tgcatgttgtatcctttcaccagctggtgtccatga
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