Lates calcarifer (barramundi perch): 108881061
Help
Entry
108881061 CDS
T04895
Name
(RefSeq) sphingosine kinase 1
KO
K04718
sphingosine kinase [EC:
2.7.1.91
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00600
Sphingolipid metabolism
lcf01100
Metabolic pathways
lcf04020
Calcium signaling pathway
lcf04148
Efferocytosis
lcf04370
VEGF signaling pathway
lcf04371
Apelin signaling pathway
Module
lcf_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
108881061
09130 Environmental Information Processing
09132 Signal transduction
04370 VEGF signaling pathway
108881061
04371 Apelin signaling pathway
108881061
04020 Calcium signaling pathway
108881061
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108881061
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.91 sphingosine kinase
108881061
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAGK_cat
YegS_C
Motif
Other DBs
NCBI-GeneID:
108881061
NCBI-ProteinID:
XP_018528350
LinkDB
All DBs
Position
LG11:14459216..14472440
Genome browser
AA seq
565 aa
AA seq
DB search
MEKGASEPDPSRQRNGLVGALYGEFTDTLNDRVRYSVSLTESALTIQRISSSPGRTKVVF
NLTDCIGCRAYRGPDSADVGAYFTAYFYPFKRRWMSAGVARQRVEQCFRVALVQDPLANL
QEAEKWAHAIRDASVLQAPRRDGVAYTEVRRPCRVMILVNPHSGRGQALQLFTGHVQGML
TEASVPYTLVITEHQNHARELVRKADLSQWDALVIMSGDGLLFEVINGLMDREDWQEAIQ
TPLGILPGGSGNALAASVHHYSQSPPAWNEELLLSCGFILCKGLVGSLDLVSIHLASQQR
LFSFLSLAWGFVADVDIESEKYRHVGAIRFLMGTLVRLASLRVYQGRLAYLPVMEAPKLP
KGSIKATHPPSTPQHPSLCSSLPCRLIPNSSPNQNSRHNHNSTNSNHNTITNSSNNAITT
KRPETQSDGKTIALVDSLLPGLDQPVPESWTVVKEEDFVLVLAIYQSHLAEDLWTVPGAM
ADDGLIHLFYVTAGISRPALLRLFLAMEKGAHLACGCPHLVYEKVKALRLEPTSPQGVIT
VDGEMVEYGPVQAQIHPGLARLICG
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaggcgcctcagaaccggacccatcccgccagcggaacgggctagtgggcgcg
ctgtacggggagttcaccgacacgctcaacgacagggtccggtactcggtgagcttgacg
gagagcgccttgaccatccagaggatctcctcgtcacccggccggactaaggtggttttt
aacttgaccgactgtatcggctgccgggcgtacagagggccggacagcgcggacgtcgga
gcctacttcacagcctatttctacccgttcaagaggcgctggatgagcgccggggtggcc
cggcagagagtggagcagtgctttcgggtcgcgctggtccaggacccgctcgccaaccta
caggaggctgagaagtgggctcatgccatcagagatgcctcagtgctgcaggcgccccgg
agagacggtgtggcatatacggaggtgcgtcgtccttgccgtgtcatgatactggtgaac
cctcacagtgggcgtggccaggctctgcagctctttactggccacgtacagggcatgctc
actgaggcctctgttccctacacacttgtcatcacagagcaccagaaccacgcgcgcgag
ctggtgaggaaggctgacctgtcgcagtgggacgccctggttatcatgtctggtgatggg
ctgctgtttgaggtgataaatggtttgatggatcgagaggactggcaagaggccatacag
acccctctgggtattctgccaggtggctcaggcaacgccctggccgcctccgtccaccac
tactcacagtcacctccagcatggaacgaggagctactcttaagctgtggcttcatcctg
tgtaaaggtctggttggctccttggacctcgtgtcgatccacctggcctctcaacagcgt
ctcttctcctttctctccctggcctggggcttcgtggcagatgttgacatcgagagcgag
aagtaccgccatgtcggagcaatccgtttcctgatgggcaccctggtccgtctggcctcc
ctcagagtctatcagggcaggttagcatatttgcctgttatggaggcgccaaaacttccg
aaagggagcatcaaggctacccaccctccctccacacctcagcacccctcgctctgctcc
tcccttccttgtcggctcatccccaactcctctccgaatcagaactctcgacacaatcac
aacagcacaaattccaaccacaacaccatcaccaactcctccaacaacgccatcaccacc
aagagacctgagacccagagtgatggcaagaccatagcactggtggactctcttcttcct
ggcctggaccaaccagtcccagagagctggacagtagtcaaggaggaggactttgtcttg
gtcctggctatttaccagtcccacctcgctgaggacctgtggacggtccctggtgcaatg
gcagatgatgggctgattcatctgttctacgtgacagcaggaatctcccgtcctgccctc
ctgcgccttttcctcgccatggagaagggcgcccacttggcgtgcggctgcccccacctg
gtgtatgagaaggtgaaggccctgcggctggaacccacctctccgcaaggtgttatcact
gtggatggagagatggtggagtacgggcccgttcaggctcaaatccacccaggactggca
agacttatatgtggatga
DBGET
integrated database retrieval system