Lates calcarifer (barramundi perch): 108881424
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Entry
108881424 CDS
T04895
Name
(RefSeq) SHC-transforming protein 2 isoform X1
KO
K17447
SHC-transforming protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04012
ErbB signaling pathway
lcf04370
VEGF signaling pathway
lcf04510
Focal adhesion
lcf04910
Insulin signaling pathway
lcf05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04012 ErbB signaling pathway
108881424
04370 VEGF signaling pathway
108881424
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108881424
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
108881424
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
108881424
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PID
SH2
DUF7145
Motif
Other DBs
NCBI-GeneID:
108881424
NCBI-ProteinID:
XP_018528954
UniProt:
A0A4W6G5H7
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Position
LG17:11429985..11448116
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AA seq
724 aa
AA seq
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MLLKPKYGRFRNESVTSSDDLMQSLAMSGKVVATPVVPSSTPSLPLPPLPPLDPSTRTSS
SAGAAALADSPCLDGEQDATTTFCMLIPKMPQWKFSNSLLSRSPSNSSSSSSSSKDSSKA
AAPSQASVSPSSTSHRPSVATSASGPVASLAAVLNSCDPVCITPCSLQAIRGQRAVAAAN
SASPGGHGFGATEVMASPGGSSSSRSGMNRRTRVEGMWLGGEDFNQKGSFIHKPSQGWLH
PDKKIAGPGASYIVRYMGCIEVLKSMRSLDFNTRTQVTREAINRLCEAVPGGKGPWRKKA
LNKALQSIMGKSNLRFAGMSIAVNISIDGLGLLIPTTRQVIAHHPMQSISFASGGDTDTP
DYVAYVAKDPVNQRACHILECSDGLAQSVISTIGQAFELQFKQYLHSPPKTMASMERSVR
PEEPMWGEDEDFSEHDYYNSIPGKEPPVGGVVDSRLRPSGAPLGHIHTQPQSKTAAHMGS
PARREQASYPPGQLCYELHWDTETTSSSGLTSDGYLCADGQPSGSRDYEEHQYVNTQSLE
NLDSLAQGSSGHRGGRAPDSPKKDLFDMRPFEDALKLHEASGGSSTCTAAGGAQAGGGGV
RILEDQWPSPPRRRAPVAPNEEQLRRETWYHSRMSRRDAEKLLVRDGDFLVRESTTNPGQ
YVLTGMHCGLPKHLLLVDPEGVVRTKDMLFESISHLISYHLKNELPIVAAESELHLKQVV
RRKQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgctccttaagccaaagtatggccgctttcgcaacgagtctgtgacctcctctgacgac
ctgatgcagagcctagccatgagcggcaaagttgtggccacgccggtagtcccctcctcc
accccgagcctccctctgcctcccctgcctcctctggatcccagcaccaggacctcctcc
tctgctggggctgcagccctggctgactccccttgcctggatggggaacaggatgccacc
acaaccttctgcatgctcatccctaagatgccccagtggaagttctccaactccttgctc
agccggagcccatccaactccagctccagctccagctctagcaaggactcgagcaaggca
gcagctccttcccaggcctctgtctccccctcttcgacatcccacaggcccagcgttgcc
acctctgccagcggccctgtggccagtcttgcggctgtgctcaactcctgtgaccctgtg
tgtatcaccccctgttccctacaggccatccggggccagagagcggttgcagcggcaaac
tctgccagtccgggagggcacggatttggggccacagaggtcatggcgagccctggcggt
tccagcagctccaggtcagggatgaaccgcaggacgagggtggaaggcatgtggctgggg
ggagaagacttcaaccagaagggcagcttcatccacaaaccctcccagggctggctgcac
cctgacaagaagattgcaggaccaggagcctcttatattgtcaggtacatgggctgcatt
gaagtgttgaagtcaatgcgctccctggacttcaacacccgaactcaggtgacgagggaa
gccatcaacaggctctgtgaagctgtgccaggaggaaaggggccatggaggaagaaggca
ctgaacaaagctctccagtccattatggggaagagtaacctacgatttgcaggcatgagt
atcgcagtcaatatttccatagacggccttggtctgctcatcccgaccacgcgacaggtg
atagcgcaccatcccatgcagtcaatctcatttgcctctgggggagacacagacacgcct
gattatgtggcgtatgtggccaaagacccagtgaatcagagagcatgtcatatcctggag
tgctcggacggtttagcccagagtgtcatcagcaccatcggccaggccttcgagctgcag
ttcaaacagtacctgcacagtcctcccaaaacaatggcatctatggagaggtctgtcagg
ccagaagagccaatgtggggggaggatgaggacttctctgagcacgattactacaacagc
atcccagggaaggagcctcctgttgggggtgtagtggactccaggctcaggcccagtgga
gcacctctgggtcacatccacacccagccacagagcaagacagcagcacatatgggctca
ccagccaggagggagcaagcatcttacccccctggtcagctgtgttatgagctccactgg
gacactgagaccacaagcagctcaggtctgacatcagatggttacctgtgtgctgacggc
caaccgtctggcagcagagactatgaggagcatcagtatgttaacacccagagtctggaa
aacctggattcattagcacaggggtccagtggacacagaggaggcagggcacccgacagt
cccaagaaagatctctttgacatgaggccctttgaggatgcgctgaagctccacgaggcc
agtggtggctccagtacatgcaccgcagctggaggtgctcaggctggagggggcggcgtc
cggatcctggaggaccagtggcccagccctccacgccgtcgagctcctgtggctccaaat
gaggagcagctccgcagggagacctggtaccacagccgcatgagccgaagagacgcggag
aaactcctggtccgagacggagatttcctcgtccgggagagcacgaccaaccccggacag
tatgtgctgacgggcatgcattgcggccttcccaaacacctactgctagtggaccctgag
ggagtggtgcgaaccaaagacatgttatttgagagcataagccaccttatctcataccac
ctaaagaatgagctgcctattgtagcagcagagagtgagctccacctcaaacaggtggtc
aggaggaaacagtga
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