Lates calcarifer (barramundi perch): 108881464
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Entry
108881464 CDS
T04895
Symbol
b4galnt1b
Name
(RefSeq) LOW QUALITY PROTEIN: beta-1,4 N-acetylgalactosaminyltransferase 1
KO
K00725
(N-Acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase [EC:
2.4.1.92
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00600
Sphingolipid metabolism
lcf00604
Glycosphingolipid biosynthesis - ganglio series
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
108881464 (b4galnt1b)
09107 Glycan biosynthesis and metabolism
00604 Glycosphingolipid biosynthesis - ganglio series
108881464 (b4galnt1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108881464 (b4galnt1b)
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.92 (N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase
108881464 (b4galnt1b)
Glycosyltransferases [BR:
lcf01003
]
Glycan extension
Glycolipid
108881464 (b4galnt1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
FKRP_N
Motif
Other DBs
NCBI-GeneID:
108881464
NCBI-ProteinID:
XP_018529011
UniProt:
A0AAJ7LPS3
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Position
LG12:21647829..21658840
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AA seq
531 aa
AA seq
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MRSLRKTVLLAILVSVVLVLALLHSWPTRAYNTVDVWQRPGPIVERHLEDRLPEPDQRLG
NIPFHVRDNVASLLARNGCVCEGESGGVNLPFAQLLFPRVSAHPLHTAFEASELEEMKRR
RAKEYKSFQKRSQTPADVLIVAEANNPLQYPTQGVEVRPLKTIIIPGLALHNLPRDHYSI
NITATLGTLNVAAEVDGVKIKGDGEMHMTLSSSLLPNLNRQLQFVTYTNTLFHPSTADTV
QFETEGHQAVFSIKIRHGVTPKLYNTGSKGDYNVSALVTIATKTFLRYDKLQDLIDSIRR
YYPTVTIVIADDSENPKTISGPYIEHYIMPFGKGWFAGRNLAVSQVTTKYVLWVDDDFIF
TANTKLEKLVDVLERTTLDLVGGAVREATGYTATYRQTISIEPGEEDGDCLHMRRGFHHI
IQGFPNCVVTDGVINFFLARTDKVQQVGFDPRLARVAHLEFFIDGLGSLHVGSCDDVIVN
HATKIKLPWVSQSESDKIYAKFRYPPASSDATHTKNGLLFFKNRFQCLTHN
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgcgctccctaaggaagacggtgttgctcgccattctggtgtctgtggtgctggtactg
gccctcctccattcatggccaactcgggcctacaacacagtggatgtgtggcagcgacca
gggccaatagtagagaggcacctggaggacaggctcccagaaccagaccaacgattaggc
aacatcccctttcatgtgagggataatgtggcaagtttgttggcccgtaacgggtgcgta
tgtgagggtgagagtggaggagtaaacctgcccttcgcccaactcttattcccgcgggtg
tcagctcacccgctgcacactgcctttgaggcctccgagctggaggagatgaagaggaga
cgggccaaagagtacaagagtttccagaagaggtcacagactcctgcagatgttctcatt
gttgcagaggctaacaatcccttacagtatccaacacagggggtggaggtacggcccctg
aaaacaatcatcatcccaggcttggccttacacaaccttcccagagaccattactcaata
aacatcactgccacactgggaacgctgaatgtggcagcagaggtagacggggtgaaaatc
aaaggcgatggtgagatgcacatgactctgtctagcagcctcctgccgaacctgaaccga
cagctgcagtttgtcacctacacaaacactctgtttcaccctagcacagctgacacagtg
cagtttgagacagaggggcatcaagctgtcttcagtatcaagatccgtcacggtgtaaca
cccaaactgtacaacactggatccaaaggagactacaatgtgagcgccctcgttaccata
gctacaaagactttcctgcgttatgataagcttcaagatcttatcgacagcatcagaaga
tactatcctactgtcaccatagtaatcgctgatgacagtgaaaatcccaaaaccatctct
gggccttacatcgaacactacatcatgccttttggaaagggttggtttgccggacgaaac
ctggccgtatcccaggtgaccacaaagtacgtgctgtgggtggatgatgacttcattttc
acggccaacacaaagctggagaagcttgtggatgttttagagaggaccactctggatctg
gtgggtggtgcagtgcgggaggccacagggtatactgccacatacagacagaccatctcc
atcgagccaggggaggaggacggtgactgtttacacatgaggagaggatttcatcacatc
atccaaggcttccccaactgtgtcgtcactgatggggtcattaacttctttctggctcgc
actgacaaagtccagcaggtcggttttgacccgcgcctcgccagggtagctcacctggag
tttttcatcgacggcctgggatctctccacgtgggctcttgcgatgacgtcattgtcaat
cacgccaccaaaatcaaacttccctgggtcagccagtcagagagcgacaagatttatgcc
aagtttcgttacccgccggcctcgtccgacgccacgcacacgaaaaatggcctcctgttc
ttcaagaatcgattccagtgtttgactcataattag
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