Lates calcarifer (barramundi perch): 108881527
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Entry
108881527 CDS
T04895
Name
(RefSeq) caspase-8
KO
K04398
caspase 8 [EC:
3.4.22.61
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04115
p53 signaling pathway
lcf04210
Apoptosis
lcf04217
Necroptosis
lcf04620
Toll-like receptor signaling pathway
lcf04621
NOD-like receptor signaling pathway
lcf04622
RIG-I-like receptor signaling pathway
lcf04623
Cytosolic DNA-sensing pathway
lcf04625
C-type lectin receptor signaling pathway
lcf05132
Salmonella infection
lcf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
108881527
04217 Necroptosis
108881527
04115 p53 signaling pathway
108881527
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
108881527
04621 NOD-like receptor signaling pathway
108881527
04622 RIG-I-like receptor signaling pathway
108881527
04623 Cytosolic DNA-sensing pathway
108881527
04625 C-type lectin receptor signaling pathway
108881527
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108881527
09171 Infectious disease: bacterial
05132 Salmonella infection
108881527
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108881527
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.61 caspase-8
108881527
Peptidases and inhibitors [BR:
lcf01002
]
Cysteine peptidases
Family C14: caspase family
108881527
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C14
DED
Dredd_2nd
PYRIN
Motif
Other DBs
NCBI-GeneID:
108881527
NCBI-ProteinID:
XP_018529105
UniProt:
A0AAJ8B6L3
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All DBs
Position
LG1:17414171..17418804
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AA seq
540 aa
AA seq
DB search
MDFQRLLLEVGKALCKDEVKALAFLCTDLLGQSLTSVELASDLFSRLADHDHLSPEQPHL
LPELLLTIHRNRLVRDLNLTDPEFTTRTFISPYRKLLYNLSEEITDNDLKQLKFLLNKTL
PRRKLEENVTTLEVFLEMEHMDLLSDTNLNELEKIIASVCPMLKEKINQFKARPAQETSR
PMSMSYHPEPNQATQTLNAERTTSHERSALLFLSQCSQCSSNTSVDVPDECGALFSGLSV
SSTENRNFCCFKSDDFGFLPPQGNEASSERETSQTTDTNNEVLGIYPMTSARRGICLIVN
NYRFSKPTLKDRVGTMIDEKRLQVVFEWLGFQIEIQHDCTSKEMLSVLQELGRRDHKQMD
CVVCCILSHGQERGVYGVDSDTVKIKQLMEPLNGLNCPTLAGKPKLFFIQACQGTNEQKA
VYVETDGPACDFVYSDAITAKDSIPSDADFLLAMATVPSFISFRDKKNGTWFIHSLYQNL
LQMVPGGVDLVSILTKVNADVSQKTDKTGEKKQMPQIASSLRKKVVFPVPRASPPMLSSD
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggattttcagaggctgctgttagaggtggggaaggccctgtgcaaggacgaggtaaaa
gctctagcttttctctgcaccgacctcctgggccaaagcctgacctctgtggagttggcc
agcgacctcttctctcgcctggcagatcatgaccacctctcacccgagcagccacacctg
ttgcctgaacttctcctcaccatacatcgcaaccgtctggtccgggacctcaatctcact
gaccctgagtttacaaccaggaccttcatctctccttacaggaagctgctgtacaacctg
tctgaggagattacagataatgacttgaagcaactgaagttcttgttgaacaaaacactc
ccacgaagaaaactggaggaaaatgttaccacgctggaagtcttcctggagatggagcac
atggacctcctcagtgacactaatttaaacgaactggagaaaattattgcgtcagtctgt
cccatgttgaaagaaaagatcaaccagttcaaagcacggccggctcaagagacgagtcga
ccaatgtctatgtcttaccatcctgagccaaaccaggctactcaaactttaaatgctgaa
aggactacctcacatgaaagatcagcgctgctatttttgtcccagtgttcccagtgttct
tccaacacatctgtggatgttccagatgagtgtggagcccttttttctggactgagtgtt
tcaagcactgaaaatagaaacttttgctgttttaaaagtgatgactttggatttttgcca
cctcaaggaaacgaggcctcctctgaaagggagacgtctcagaccacagacacaaacaat
gaggttttgggaatatatcccatgacttcagcaaggagaggtatctgcctgatagttaac
aactacaggttcagtaaacccactctcaaggaccgagtggggaccatgattgatgaaaag
cgcctgcaggttgtgtttgaatggctcggctttcagatcgagatacagcacgactgtaca
agcaaagagatgctgtctgtgttgcaggagctcggcaggagagaccacaagcagatggac
tgtgtggtatgctgtattctcagtcatgggcaggaaagaggcgtgtacggtgtggacagc
gacaccgtcaagatcaaacagctgatggaacctctgaatggattaaactgtcccactttg
gcaggaaaacccaagctgtttttcattcaggcttgccagggcaccaatgagcaaaaggcc
gtctatgtcgagactgacggtcctgcttgcgattttgtttatagtgatgctattacagcg
aaagactccatcccatctgatgctgatttcctgctggcaatggccactgttccttctttc
atatccttcagagacaagaagaatggcacctggtttatccactcgttgtaccaaaacctt
ctccagatggttcccgggggggttgacctcgtgtccatcctgacaaaggtcaatgcggat
gttagccagaagactgacaaaacgggcgaaaaaaagcagatgcctcagatcgcctcctca
ctcaggaagaaagtggtcttcccggtccctagagcctctcctcccatgctgtcgtctgat
tga
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