Lates calcarifer (barramundi perch): 108881656
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Entry
108881656 CDS
T04895
Name
(RefSeq) interleukin-6 receptor subunit beta isoform X1
KO
K05060
interleukin 6 signal transducer
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108881656
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
lcf04050
]
108881656
04090 CD molecules [BR:
lcf04090
]
108881656
Cytokine receptors [BR:
lcf04050
]
Interleukin receptor families
IL6/12 receptor family
108881656
CD molecules [BR:
lcf04090
]
Proteins
108881656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Pur_ac_phosph_N
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
108881656
NCBI-ProteinID:
XP_018529244
UniProt:
A0A4W6CU38
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Position
LG13:26204003..26213510
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AA seq
802 aa
AA seq
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MDLWSSKLYFATWTVMSLLGVFSHEVTVKNSDLKLCKDDERVCVTDLRDCGPRPASSIQK
TLNMTCYHTLYTSMTCELSQASDSHAEPDVSLIFSSVNKIISCHAIFNPASTLNVTARIM
NYLRRSEIRSQPHTVFVYEAVKPSPPVLTVLGSTDDSVVVSWRSSSDGSCRLRYRVDGAQ
TWSQSPGVSPVFQHQEQVYTIKHLLPFTVYRAAVACRKYHIWSNWSPDVTVRTLDRAPSR
PPEVCYRVERADSPHLHLMWKEPDLREAGGRGLGYQVSCRPARRQRPQDTLIQNVTGAMA
PLEVKEGNYSVTVRAFNSAGFGPAAQLSIDTQTQNNLPSVRDLWVSSSFPAAKDLLVQWE
LSAAPPPALPVGHFNVQLRSEVHPSASRWSTVDGSITSTVIQDVDPDESYLVSVIPVYKQ
QCGSPLSLNASLQQGALMEAFDLNVVDVTKTWLTVKWAWQRKSGPIRVNRYRVMLKKNSE
RHNTVLSFPPVSLWWNQSQHTFLNLTPATEYSLLLLADDVSRNIITVTTNFDEVPVVATV
TPLLLLAVIVLIISILSRTVYKSYFFPPISSPRGSTTGQWLMHPNHQKSAELNILDITQF
QVTDVLGEKSAIVIGPNSPFSSEEDLHENTSLLPPGHLIIKLSGLKLDAEYVSDTPLTTE
LQLQSYNPDYAVNCHHSDKVFVSEERREADAAQAHEGQIWFPWREEVNMQLDLSQISYQT
EAAVKCSFHELMTKADSRCDYQITCEAQYVLNSSFLGKSDVETESGHIDCSYLICDTDYI
ANSCFTAKTAVEDRASSISIVC
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggacctgtggtcttctaaactgtactttgccacctggacagtgatgagcctcctcggt
gtgttctctcatgaagtgacggtgaagaactctgatctgaagctgtgtaaagacgatgag
agagtgtgtgtcactgacctcagagactgtggccccagaccagcttcgtctatacagaag
actctgaacatgacgtgttaccacacgttatacacgtccatgacctgtgagctgagtcag
gcgtccgacagccacgctgagcctgacgtctcgctcatcttcagcagtgtgaataaaatc
atctcctgtcacgccatcttcaacccggcctccaccctcaacgtaacagccaggataatg
aactacctgaggaggagtgagatcagatcccagcctcacactgtgtttgtttatgaagca
gtcaaaccctctcctcctgtattaactgtcctcggctccactgacgactctgttgttgtg
tcttggagaagcagcagcgacggcagctgtcggcttcgctacagagtcgacggcgctcag
acgtggtctcagtctccaggtgtctctcctgtgtttcaacatcaggagcaggtctacacc
atcaaacacctcctgccgttcaccgtctacagagcagctgtggcttgcaggaagtaccac
atctggagcaactggagccctgacgtcaccgtgaggacgctggacagagcgccctccaga
cctccagaggtgtgttaccgagtggagagagcagattctcctcaccttcatctcatgtgg
aaggagcctgacctccgtgaggctggaggtcgtggccttggataccaggtgagctgcagg
ccagcgaggaggcagcgtccgcaggacacactgattcaaaacgtcacaggggcgatggcg
cccctggaggtcaaagaggggaactacagcgtcactgtcagagcctttaactcagccggc
tttggacctgccgcacagctcagcattgacacacagacacagaacaatcttccctcagtc
agagacttgtgggtttccagttctttcccagctgccaaagaccttctggtccagtgggag
ctcagtgcagccccgccccctgccctgcctgtcggccattttaacgttcagttgcgctct
gaggtgcatccatccgccagccgctggtccacagtggacggctccatcacctccactgtg
atacaagacgttgaccctgatgagtcctacctggtcagtgtgatccccgtctacaagcag
cagtgtggatctcctctgtccctgaacgccagcctgcagcagggagctctgatggaggcg
ttcgacctgaatgttgttgacgtgaccaaaacatggctgacagtcaagtgggcgtggcag
aggaagtctggaccaatcagagtgaacagatacagagtgatgctgaagaaaaactcagag
agacacaacactgttctctccttcccacctgtgtctctgtggtggaaccaatcacagcac
acctttctcaacctgacacctgccactgagtattctctcctcctgttggccgacgacgtt
tccagaaacatcatcaccgtcacaaccaattttgatgaggtcccagtcgtggccacagtg
actcctctgctgctgctggctgtcattgtgttaatcatcagcatcttgtccaggactgtg
tacaagtcgtacttcttcccccccatctccagcccccggggcagtacgacaggccagtgg
ctaatgcacccaaaccaccagaagtctgcagagttaaacatcctggatatcacacagttc
caggtgacagacgtactcggagagaaaagtgccatcgtgatcggacctaactctccgttt
tcctcagaggaggacctgcatgaaaacacgtctctgctgccacccggtcacttaatcatc
aaactgtcaggcctcaaactggacgctgagtatgtctctgatactccactaaccaccgag
ctccagctccagtcctacaaccctgactatgcagtgaactgccatcattcggacaaggtt
ttcgtgtctgaggagaggcgagaggccgacgctgctcaggctcatgaaggtcagatctgg
tttccttggagagaggaagtgaacatgcagctcgatctctctcagatttcatatcagaca
gaagccgctgtaaagtgcagctttcacgagctcatgacgaaggctgacagtcgctgtgat
tatcagataacctgtgaggcccagtatgtgctaaactcttcctttctgggtaaaagcgat
gttgaaacagagagcggacacatcgactgctcttatctgatctgtgacactgactatatc
gcaaacagctgctttactgcaaaaactgcagttgaagacagagccagcagcatcagtatt
gtatgctag
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